Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CLDN20P56880 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN20P56880 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN20P56880 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN20P56880 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN20P56880 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN20P56880 AC073439.1-201ENST00000624121 1774 ntBASIC14.84□□□□□ -0.03
CLDN20P56880 AL139400.1-201ENST00000366220 510 ntBASIC14.84□□□□□ -0.03
CLDN20P56880 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN20P56880 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.84□□□□□ -0.03
CLDN20P56880 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN20P56880 TSEN15P1-201ENST00000423257 515 ntBASIC14.84□□□□□ -0.03
CLDN20P56880 KRT18P32-201ENST00000424695 1287 ntBASIC14.84□□□□□ -0.03
CLDN20P56880 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.84□□□□□ -0.03
CLDN20P56880 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.84□□□□□ -0.03
CLDN20P56880 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN20P56880 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CLDN20P56880 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.84□□□□□ -0.03
CLDN20P56880 KRT8P23-201ENST00000560090 1207 ntBASIC14.84□□□□□ -0.03
CLDN20P56880 AP000842.3-202ENST00000569238 1080 ntBASIC14.84□□□□□ -0.03
CLDN20P56880 AC020765.3-201ENST00000613051 740 ntBASIC14.84□□□□□ -0.03
CLDN20P56880 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CLDN20P56880 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN20P56880 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN20P56880 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN20P56880 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CLDN20P56880 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN20P56880 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CLDN20P56880 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CLDN20P56880 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN20P56880 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN20P56880 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CLDN20P56880 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN20P56880 GGT3P-204ENST00000453783 1664 ntBASIC14.84□□□□□ -0.03
CLDN20P56880 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CLDN20P56880 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLDN20P56880 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLDN20P56880 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLDN20P56880 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLDN20P56880 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
CLDN20P56880 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLDN20P56880 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.03
CLDN20P56880 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN20P56880 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.83□□□□□ -0.04
CLDN20P56880 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.83□□□□□ -0.04
CLDN20P56880 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.83□□□□□ -0.04
CLDN20P56880 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.83□□□□□ -0.04
CLDN20P56880 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.83□□□□□ -0.04
CLDN20P56880 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLDN20P56880 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 PRYP6-201ENST00000514804 343 ntBASIC14.83□□□□□ -0.04
CLDN20P56880 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 SLC25A39P2-201ENST00000537614 270 ntBASIC14.83□□□□□ -0.04
CLDN20P56880 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.83□□□□□ -0.04
CLDN20P56880 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.83□□□□□ -0.04
CLDN20P56880 AC009093.7-201ENST00000623853 1223 ntBASIC14.83□□□□□ -0.04
CLDN20P56880 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN20P56880 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.83□□□□□ -0.04
CLDN20P56880 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.83□□□□□ -0.04
CLDN20P56880 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.83□□□□□ -0.04
CLDN20P56880 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.83□□□□□ -0.04
CLDN20P56880 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CLDN20P56880 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CLDN20P56880 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 AC022532.1-201ENST00000624563 1728 ntBASIC14.83□□□□□ -0.04
CLDN20P56880 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.83□□□□□ -0.04
CLDN20P56880 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CLDN20P56880 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN20P56880 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN20P56880 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLDN20P56880 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN20P56880 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms