Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGA2P52926 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.72□□□□□ -0.05
HMGA2P52926 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGA2P52926 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGA2P52926 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
HMGA2P52926 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
HMGA2P52926 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGA2P52926 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.72□□□□□ -0.05
HMGA2P52926 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGA2P52926 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGA2P52926 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGA2P52926 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGA2P52926 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
HMGA2P52926 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGA2P52926 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGA2P52926 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGA2P52926 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGA2P52926 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.72□□□□□ -0.05
HMGA2P52926 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGA2P52926 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGA2P52926 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGA2P52926 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
HMGA2P52926 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGA2P52926 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGA2P52926 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGA2P52926 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGA2P52926 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.71□□□□□ -0.05
HMGA2P52926 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGA2P52926 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGA2P52926 AC009090.5-201ENST00000624886 2285 ntBASIC14.71□□□□□ -0.05
HMGA2P52926 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGA2P52926 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HMGA2P52926 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
HMGA2P52926 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGA2P52926 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGA2P52926 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGA2P52926 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGA2P52926 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGA2P52926 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGA2P52926 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGA2P52926 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGA2P52926 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGA2P52926 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGA2P52926 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.71□□□□□ -0.05
HMGA2P52926 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
HMGA2P52926 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.71□□□□□ -0.05
HMGA2P52926 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HMGA2P52926 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.71□□□□□ -0.05
HMGA2P52926 MIR4751-201ENST00000578027 74 ntBASIC14.71□□□□□ -0.05
HMGA2P52926 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.71□□□□□ -0.05
HMGA2P52926 MIR4313-201ENST00000580760 101 ntBASIC14.71□□□□□ -0.05
HMGA2P52926 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.71□□□□□ -0.05
HMGA2P52926 AL121912.1-201ENST00000603683 238 ntBASIC14.71□□□□□ -0.05
HMGA2P52926 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.71□□□□□ -0.05
HMGA2P52926 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HMGA2P52926 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.71□□□□□ -0.05
HMGA2P52926 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.71□□□□□ -0.05
HMGA2P52926 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.71□□□□□ -0.05
HMGA2P52926 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HMGA2P52926 AL691432.1-201ENST00000596308 1422 ntBASIC14.71□□□□□ -0.05
HMGA2P52926 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
HMGA2P52926 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.71□□□□□ -0.05
HMGA2P52926 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.06
HMGA2P52926 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HMGA2P52926 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.71□□□□□ -0.06
HMGA2P52926 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HMGA2P52926 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.71□□□□□ -0.06
HMGA2P52926 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
HMGA2P52926 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.71□□□□□ -0.06
HMGA2P52926 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.71□□□□□ -0.06
HMGA2P52926 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGA2P52926 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGA2P52926 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.7□□□□□ -0.06
HMGA2P52926 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGA2P52926 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGA2P52926 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGA2P52926 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGA2P52926 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGA2P52926 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HMGA2P52926 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGA2P52926 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGA2P52926 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.7□□□□□ -0.06
HMGA2P52926 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.7□□□□□ -0.06
HMGA2P52926 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.7□□□□□ -0.06
HMGA2P52926 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
HMGA2P52926 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGA2P52926 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGA2P52926 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGA2P52926 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGA2P52926 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.7□□□□□ -0.06
HMGA2P52926 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGA2P52926 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGA2P52926 UNC93B7-201ENST00000509439 705 ntBASIC14.7□□□□□ -0.06
HMGA2P52926 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGA2P52926 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.7□□□□□ -0.06
HMGA2P52926 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HMGA2P52926 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGA2P52926 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGA2P52926 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGA2P52926 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms