Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
RFC3P40938 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.81□□□□□ -0.04
RFC3P40938 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.81□□□□□ -0.04
RFC3P40938 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.81□□□□□ -0.04
RFC3P40938 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.81□□□□□ -0.04
RFC3P40938 HLA-J-202ENST00000469281 1241 ntBASIC14.81□□□□□ -0.04
RFC3P40938 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.81□□□□□ -0.04
RFC3P40938 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.81□□□□□ -0.04
RFC3P40938 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.81□□□□□ -0.04
RFC3P40938 AL133215.2-201ENST00000609242 977 ntBASIC14.81□□□□□ -0.04
RFC3P40938 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.81□□□□□ -0.04
RFC3P40938 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
RFC3P40938 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.81□□□□□ -0.04
RFC3P40938 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RFC3P40938 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RFC3P40938 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.81□□□□□ -0.04
RFC3P40938 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.81□□□□□ -0.04
RFC3P40938 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.81□□□□□ -0.04
RFC3P40938 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.81□□□□□ -0.04
RFC3P40938 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.81□□□□□ -0.04
RFC3P40938 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFC3P40938 GGT3P-204ENST00000453783 1664 ntBASIC14.81□□□□□ -0.04
RFC3P40938 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.81□□□□□ -0.04
RFC3P40938 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RFC3P40938 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RFC3P40938 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
RFC3P40938 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RFC3P40938 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.8□□□□□ -0.04
RFC3P40938 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.8□□□□□ -0.04
RFC3P40938 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.8□□□□□ -0.04
RFC3P40938 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
RFC3P40938 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.8□□□□□ -0.04
RFC3P40938 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.8□□□□□ -0.04
RFC3P40938 FAM207CP-201ENST00000443486 507 ntBASIC14.8□□□□□ -0.04
RFC3P40938 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.8□□□□□ -0.04
RFC3P40938 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RFC3P40938 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.8□□□□□ -0.04
RFC3P40938 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.8□□□□□ -0.04
RFC3P40938 AC190387.1-201ENST00000551683 408 ntBASIC14.8□□□□□ -0.04
RFC3P40938 AL079307.3-201ENST00000556114 283 ntBASIC14.8□□□□□ -0.04
RFC3P40938 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
RFC3P40938 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.8□□□□□ -0.04
RFC3P40938 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RFC3P40938 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.8□□□□□ -0.04
RFC3P40938 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RFC3P40938 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RFC3P40938 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RFC3P40938 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.8□□□□□ -0.04
RFC3P40938 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 HYMAI-201ENST00000635591 3347 ntBASIC14.79□□□□□ -0.04
RFC3P40938 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.79□□□□□ -0.04
RFC3P40938 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFC3P40938 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms