Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CHRNA5P30532 AC018470.1-201ENST00000624790 3129 ntBASIC19.54■□□□□ 0.72
CHRNA5P30532 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.53■□□□□ 0.72
CHRNA5P30532 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.53■□□□□ 0.72
CHRNA5P30532 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA5P30532 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA5P30532 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CHRNA5P30532 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA5P30532 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CHRNA5P30532 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CHRNA5P30532 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA5P30532 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.53■□□□□ 0.72
CHRNA5P30532 AL138709.1-201ENST00000614840 1693 ntBASIC19.53■□□□□ 0.72
CHRNA5P30532 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CHRNA5P30532 FZD10-202ENST00000539839 3282 ntBASIC19.53■□□□□ 0.72
CHRNA5P30532 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA5P30532 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA5P30532 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA5P30532 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA5P30532 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA5P30532 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA5P30532 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA5P30532 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC19.53■□□□□ 0.72
CHRNA5P30532 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.53■□□□□ 0.72
CHRNA5P30532 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA5P30532 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC19.53■□□□□ 0.72
CHRNA5P30532 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.53■□□□□ 0.72
CHRNA5P30532 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA5P30532 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA5P30532 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.53■□□□□ 0.72
CHRNA5P30532 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CHRNA5P30532 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.53■□□□□ 0.72
CHRNA5P30532 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.53■□□□□ 0.72
CHRNA5P30532 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.53■□□□□ 0.72
CHRNA5P30532 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA5P30532 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA5P30532 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA5P30532 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.53■□□□□ 0.72
CHRNA5P30532 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.53■□□□□ 0.72
CHRNA5P30532 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNA5P30532 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
CHRNA5P30532 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNA5P30532 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.52■□□□□ 0.72
CHRNA5P30532 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNA5P30532 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNA5P30532 AL592424.1-201ENST00000563624 1536 ntBASIC19.52■□□□□ 0.72
CHRNA5P30532 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.52■□□□□ 0.72
CHRNA5P30532 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNA5P30532 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CHRNA5P30532 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.52■□□□□ 0.72
CHRNA5P30532 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CHRNA5P30532 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CHRNA5P30532 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNA5P30532 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.52■□□□□ 0.72
CHRNA5P30532 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.52■□□□□ 0.72
CHRNA5P30532 PHKG1P2-201ENST00000457537 863 ntBASIC19.52■□□□□ 0.72
CHRNA5P30532 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.52■□□□□ 0.72
CHRNA5P30532 MIR5572-201ENST00000583188 137 ntBASIC19.52■□□□□ 0.72
CHRNA5P30532 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.52■□□□□ 0.72
CHRNA5P30532 AL451050.2-201ENST00000606967 682 ntBASIC19.52■□□□□ 0.72
CHRNA5P30532 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNA5P30532 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.52■□□□□ 0.72
CHRNA5P30532 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNA5P30532 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CHRNA5P30532 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNA5P30532 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
CHRNA5P30532 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNA5P30532 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNA5P30532 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CHRNA5P30532 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.52■□□□□ 0.71
CHRNA5P30532 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHRNA5P30532 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CHRNA5P30532 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHRNA5P30532 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CHRNA5P30532 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHRNA5P30532 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA5P30532 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA5P30532 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA5P30532 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA5P30532 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA5P30532 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.51■□□□□ 0.71
CHRNA5P30532 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
CHRNA5P30532 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
CHRNA5P30532 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA5P30532 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA5P30532 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA5P30532 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.51■□□□□ 0.71
CHRNA5P30532 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC19.51■□□□□ 0.71
CHRNA5P30532 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.51■□□□□ 0.71
CHRNA5P30532 AC245100.5-201ENST00000452108 331 ntBASIC19.51■□□□□ 0.71
CHRNA5P30532 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.51■□□□□ 0.71
CHRNA5P30532 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA5P30532 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA5P30532 HNRNPUP1-201ENST00000554987 333 ntBASIC19.51■□□□□ 0.71
CHRNA5P30532 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.51■□□□□ 0.71
CHRNA5P30532 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA5P30532 KRT8P19-201ENST00000551916 1455 ntBASIC19.51■□□□□ 0.71
CHRNA5P30532 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA5P30532 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNA5P30532 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms