Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHC1P29353 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHC1P29353 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHC1P29353 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.84□□□□□ -0.03
SHC1P29353 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHC1P29353 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SHC1P29353 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHC1P29353 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.84□□□□□ -0.03
SHC1P29353 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHC1P29353 AC073439.1-201ENST00000624121 1774 ntBASIC14.84□□□□□ -0.03
SHC1P29353 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHC1P29353 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SHC1P29353 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHC1P29353 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.84□□□□□ -0.03
SHC1P29353 AP006288.1-201ENST00000446065 395 ntBASIC14.84□□□□□ -0.03
SHC1P29353 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
SHC1P29353 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.84□□□□□ -0.03
SHC1P29353 RN7SL589P-201ENST00000481268 310 ntBASIC14.84□□□□□ -0.03
SHC1P29353 AC069335.1-201ENST00000489972 472 ntBASIC14.84□□□□□ -0.03
SHC1P29353 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHC1P29353 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.84□□□□□ -0.03
SHC1P29353 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.84□□□□□ -0.03
SHC1P29353 AC093520.2-201ENST00000561830 333 ntBASIC14.84□□□□□ -0.03
SHC1P29353 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.84□□□□□ -0.03
SHC1P29353 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
SHC1P29353 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.84□□□□□ -0.03
SHC1P29353 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.84□□□□□ -0.03
SHC1P29353 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.84□□□□□ -0.03
SHC1P29353 AC027307.2-201ENST00000591252 911 ntBASIC14.84□□□□□ -0.03
SHC1P29353 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.84□□□□□ -0.03
SHC1P29353 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.84□□□□□ -0.03
SHC1P29353 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.84□□□□□ -0.03
SHC1P29353 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.84□□□□□ -0.03
SHC1P29353 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHC1P29353 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SHC1P29353 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHC1P29353 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.84□□□□□ -0.03
SHC1P29353 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHC1P29353 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
SHC1P29353 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SHC1P29353 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHC1P29353 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.84□□□□□ -0.03
SHC1P29353 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.84□□□□□ -0.03
SHC1P29353 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHC1P29353 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.84□□□□□ -0.03
SHC1P29353 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHC1P29353 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHC1P29353 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.83□□□□□ -0.03
SHC1P29353 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHC1P29353 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.83□□□□□ -0.03
SHC1P29353 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHC1P29353 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHC1P29353 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.83□□□□□ -0.03
SHC1P29353 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHC1P29353 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.83□□□□□ -0.03
SHC1P29353 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHC1P29353 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.83□□□□□ -0.04
SHC1P29353 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SHC1P29353 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
SHC1P29353 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.83□□□□□ -0.04
SHC1P29353 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.83□□□□□ -0.04
SHC1P29353 AL592309.1-201ENST00000443127 649 ntBASIC14.83□□□□□ -0.04
SHC1P29353 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SHC1P29353 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.83□□□□□ -0.04
SHC1P29353 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.83□□□□□ -0.04
SHC1P29353 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SHC1P29353 LINC01225-203ENST00000563550 1244 ntBASIC14.83□□□□□ -0.04
SHC1P29353 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.83□□□□□ -0.04
SHC1P29353 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SHC1P29353 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SHC1P29353 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.83□□□□□ -0.04
SHC1P29353 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SHC1P29353 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.83□□□□□ -0.04
SHC1P29353 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.83□□□□□ -0.04
SHC1P29353 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHC1P29353 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms