Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
CHMLP26374 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMLP26374 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMLP26374 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.41■□□□□ 0.7
CHMLP26374 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.4■□□□□ 0.7
CHMLP26374 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMLP26374 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMLP26374 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMLP26374 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.4■□□□□ 0.7
CHMLP26374 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CHMLP26374 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.4■□□□□ 0.7
CHMLP26374 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMLP26374 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMLP26374 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMLP26374 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMLP26374 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMLP26374 AL139010.1-201ENST00000454878 894 ntBASIC19.4■□□□□ 0.7
CHMLP26374 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.4■□□□□ 0.7
CHMLP26374 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.4■□□□□ 0.7
CHMLP26374 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMLP26374 BANF1P1-201ENST00000553684 263 ntBASIC19.4■□□□□ 0.7
CHMLP26374 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.4■□□□□ 0.7
CHMLP26374 MIR3687-2-201ENST00000577708 61 ntBASIC19.4■□□□□ 0.7
CHMLP26374 MIR4313-201ENST00000580760 101 ntBASIC19.4■□□□□ 0.7
CHMLP26374 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMLP26374 MIR3687-1-201ENST00000614492 61 ntBASIC19.4■□□□□ 0.7
CHMLP26374 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMLP26374 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMLP26374 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMLP26374 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHMLP26374 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.4■□□□□ 0.7
CHMLP26374 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMLP26374 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMLP26374 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMLP26374 AC126177.1-201ENST00000547829 2218 ntBASIC19.4■□□□□ 0.7
CHMLP26374 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMLP26374 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.4■□□□□ 0.7
CHMLP26374 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHMLP26374 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.39■□□□□ 0.7
CHMLP26374 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.39■□□□□ 0.7
CHMLP26374 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.39■□□□□ 0.7
CHMLP26374 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.39■□□□□ 0.7
CHMLP26374 AC020658.6-201ENST00000623564 1870 ntBASIC19.39■□□□□ 0.7
CHMLP26374 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHMLP26374 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.39■□□□□ 0.7
CHMLP26374 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CHMLP26374 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHMLP26374 LINC00554-201ENST00000564841 3011 ntBASIC19.39■□□□□ 0.69
CHMLP26374 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMLP26374 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.39■□□□□ 0.69
CHMLP26374 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.39■□□□□ 0.69
CHMLP26374 AC013268.4-201ENST00000637413 2228 ntBASIC19.39■□□□□ 0.69
CHMLP26374 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMLP26374 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMLP26374 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.39■□□□□ 0.69
CHMLP26374 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMLP26374 KRT18P32-201ENST00000424695 1287 ntBASIC19.39■□□□□ 0.69
CHMLP26374 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.39■□□□□ 0.69
CHMLP26374 EEF1DP4-201ENST00000446006 880 ntBASIC19.39■□□□□ 0.69
CHMLP26374 AP000344.2-201ENST00000512987 629 ntBASIC19.39■□□□□ 0.69
CHMLP26374 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.39■□□□□ 0.69
CHMLP26374 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.39■□□□□ 0.69
CHMLP26374 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.39■□□□□ 0.69
CHMLP26374 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.39■□□□□ 0.69
CHMLP26374 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
CHMLP26374 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMLP26374 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHMLP26374 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHMLP26374 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.39■□□□□ 0.69
CHMLP26374 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.39■□□□□ 0.69
CHMLP26374 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.39■□□□□ 0.69
CHMLP26374 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMLP26374 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.39■□□□□ 0.69
CHMLP26374 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
CHMLP26374 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMLP26374 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.39■□□□□ 0.69
CHMLP26374 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHMLP26374 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CHMLP26374 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CHMLP26374 AC073347.1-201ENST00000421633 2643 ntBASIC19.38■□□□□ 0.69
CHMLP26374 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CHMLP26374 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMLP26374 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CHMLP26374 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMLP26374 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
CHMLP26374 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CHMLP26374 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMLP26374 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CHMLP26374 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMLP26374 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMLP26374 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMLP26374 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms