Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AF228730.6-201ENST00000641497 218 ntBASIC13.88□□□□□ -0.19
CD40P25942 AC084121.3-201ENST00000641716 218 ntBASIC13.88□□□□□ -0.19
CD40P25942 AC105233.6-201ENST00000642093 218 ntBASIC13.88□□□□□ -0.19
CD40P25942 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD40P25942 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD40P25942 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CD40P25942 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.88□□□□□ -0.19
CD40P25942 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD40P25942 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
CD40P25942 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
CD40P25942 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD40P25942 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.88□□□□□ -0.19
CD40P25942 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
CD40P25942 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.87□□□□□ -0.19
CD40P25942 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.87□□□□□ -0.19
CD40P25942 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.87□□□□□ -0.19
CD40P25942 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CD40P25942 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
CD40P25942 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.87□□□□□ -0.19
CD40P25942 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.87□□□□□ -0.19
CD40P25942 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CD40P25942 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
CD40P25942 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.87□□□□□ -0.19
CD40P25942 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.87□□□□□ -0.19
CD40P25942 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
CD40P25942 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.87□□□□□ -0.19
CD40P25942 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.87□□□□□ -0.19
CD40P25942 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.87□□□□□ -0.19
CD40P25942 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.87□□□□□ -0.19
CD40P25942 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.87□□□□□ -0.19
CD40P25942 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.87□□□□□ -0.19
CD40P25942 AL109936.8-201ENST00000641772 604 ntBASIC13.87□□□□□ -0.19
CD40P25942 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CD40P25942 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.87□□□□□ -0.19
CD40P25942 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CD40P25942 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.87□□□□□ -0.19
CD40P25942 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CD40P25942 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CD40P25942 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CD40P25942 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC13.87□□□□□ -0.19
CD40P25942 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CD40P25942 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 AC006449.6-201ENST00000612330 2296 ntBASIC13.87□□□□□ -0.19
CD40P25942 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40P25942 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CD40P25942 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CD40P25942 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.86□□□□□ -0.19
CD40P25942 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.86□□□□□ -0.19
CD40P25942 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40P25942 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
CD40P25942 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CD40P25942 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.86□□□□□ -0.19
CD40P25942 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.86□□□□□ -0.19
CD40P25942 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CD40P25942 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CD40P25942 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CD40P25942 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40P25942 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40P25942 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40P25942 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40P25942 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD40P25942 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40P25942 HAUS4P1-201ENST00000406739 1145 ntBASIC13.86□□□□□ -0.19
CD40P25942 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.86□□□□□ -0.19
CD40P25942 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.86□□□□□ -0.19
CD40P25942 HIST3H2BA-201ENST00000436555 524 ntBASIC13.86□□□□□ -0.19
CD40P25942 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD40P25942 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.86□□□□□ -0.19
CD40P25942 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.86□□□□□ -0.19
CD40P25942 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
CD40P25942 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CD40P25942 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.86□□□□□ -0.19
CD40P25942 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.86□□□□□ -0.19
CD40P25942 AL662799.1-202ENST00000614205 422 ntBASIC13.86□□□□□ -0.19
CD40P25942 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.86□□□□□ -0.19
CD40P25942 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40P25942 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD40P25942 KRT8P37-201ENST00000451609 1420 ntBASIC13.86□□□□□ -0.19
CD40P25942 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.86□□□□□ -0.19
CD40P25942 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CD40P25942 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms