Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA6P23229 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA6P23229 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.71■□□□□ 0.75
ITGA6P23229 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.71■□□□□ 0.75
ITGA6P23229 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA6P23229 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ITGA6P23229 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA6P23229 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
ITGA6P23229 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ITGA6P23229 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ITGA6P23229 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.71■□□□□ 0.75
ITGA6P23229 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA6P23229 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.71■□□□□ 0.75
ITGA6P23229 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.71■□□□□ 0.75
ITGA6P23229 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA6P23229 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.71■□□□□ 0.75
ITGA6P23229 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ITGA6P23229 HNRNPUP1-201ENST00000554987 333 ntBASIC19.71■□□□□ 0.75
ITGA6P23229 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
ITGA6P23229 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
ITGA6P23229 AL450472.2-201ENST00000603663 1156 ntBASIC19.71■□□□□ 0.75
ITGA6P23229 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.71■□□□□ 0.75
ITGA6P23229 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.71■□□□□ 0.75
ITGA6P23229 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ITGA6P23229 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA6P23229 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA6P23229 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA6P23229 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA6P23229 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA6P23229 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA6P23229 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ITGA6P23229 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.71■□□□□ 0.75
ITGA6P23229 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ITGA6P23229 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA6P23229 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.7■□□□□ 0.74
ITGA6P23229 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ITGA6P23229 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA6P23229 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA6P23229 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA6P23229 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA6P23229 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.7■□□□□ 0.74
ITGA6P23229 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA6P23229 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA6P23229 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA6P23229 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.7■□□□□ 0.74
ITGA6P23229 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.7■□□□□ 0.74
ITGA6P23229 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.7■□□□□ 0.74
ITGA6P23229 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA6P23229 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.7■□□□□ 0.74
ITGA6P23229 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.7■□□□□ 0.74
ITGA6P23229 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.7■□□□□ 0.74
ITGA6P23229 ARSEP1-201ENST00000420443 635 ntBASIC19.7■□□□□ 0.74
ITGA6P23229 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.7■□□□□ 0.74
ITGA6P23229 AC092552.1-201ENST00000547243 906 ntBASIC19.7■□□□□ 0.74
ITGA6P23229 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA6P23229 AL008721.1-201ENST00000609964 604 ntBASIC19.7■□□□□ 0.74
ITGA6P23229 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ITGA6P23229 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA6P23229 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.7■□□□□ 0.74
ITGA6P23229 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.7■□□□□ 0.74
ITGA6P23229 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA6P23229 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA6P23229 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA6P23229 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.7■□□□□ 0.74
ITGA6P23229 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.7■□□□□ 0.74
ITGA6P23229 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA6P23229 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
ITGA6P23229 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.69■□□□□ 0.74
ITGA6P23229 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA6P23229 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.69■□□□□ 0.74
ITGA6P23229 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA6P23229 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA6P23229 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA6P23229 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.69■□□□□ 0.74
ITGA6P23229 AC136604.1-201ENST00000418535 575 ntBASIC19.69■□□□□ 0.74
ITGA6P23229 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.69■□□□□ 0.74
ITGA6P23229 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.69■□□□□ 0.74
ITGA6P23229 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.69■□□□□ 0.74
ITGA6P23229 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA6P23229 AC104596.2-201ENST00000512793 793 ntBASIC19.69■□□□□ 0.74
ITGA6P23229 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA6P23229 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.69■□□□□ 0.74
ITGA6P23229 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.69■□□□□ 0.74
ITGA6P23229 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA6P23229 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.69■□□□□ 0.74
ITGA6P23229 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
ITGA6P23229 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ITGA6P23229 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19.69■□□□□ 0.74
ITGA6P23229 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.69■□□□□ 0.74
ITGA6P23229 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
ITGA6P23229 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.69■□□□□ 0.74
ITGA6P23229 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.69■□□□□ 0.74
ITGA6P23229 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.69■□□□□ 0.74
ITGA6P23229 AC018892.3-201ENST00000623986 2499 ntBASIC19.69■□□□□ 0.74
ITGA6P23229 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA6P23229 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA6P23229 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA6P23229 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
ITGA6P23229 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.69■□□□□ 0.74
ITGA6P23229 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms