Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH3P22223 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CDH3P22223 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH3P22223 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH3P22223 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH3P22223 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH3P22223 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH3P22223 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH3P22223 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH3P22223 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH3P22223 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH3P22223 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.14
CDH3P22223 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH3P22223 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH3P22223 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH3P22223 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH3P22223 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CDH3P22223 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH3P22223 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CDH3P22223 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH3P22223 CYP2T1P-202ENST00000641596 2535 ntBASIC15.89■□□□□ 0.13
CDH3P22223 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CDH3P22223 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH3P22223 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH3P22223 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH3P22223 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CDH3P22223 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH3P22223 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH3P22223 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH3P22223 CYMP-203ENST00000474680 1263 ntBASIC15.89■□□□□ 0.13
CDH3P22223 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH3P22223 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH3P22223 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH3P22223 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.89■□□□□ 0.13
CDH3P22223 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.89■□□□□ 0.13
CDH3P22223 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH3P22223 AL355385.1-201ENST00000606123 409 ntBASIC15.89■□□□□ 0.13
CDH3P22223 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH3P22223 Z92544.3-201ENST00000624747 417 ntBASIC15.89■□□□□ 0.13
CDH3P22223 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH3P22223 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CDH3P22223 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH3P22223 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH3P22223 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDH3P22223 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDH3P22223 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH3P22223 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH3P22223 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CDH3P22223 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDH3P22223 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH3P22223 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
CDH3P22223 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH3P22223 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDH3P22223 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH3P22223 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDH3P22223 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CDH3P22223 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CDH3P22223 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CDH3P22223 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CDH3P22223 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 MIR346-201ENST00000362234 95 ntBASIC15.88■□□□□ 0.13
CDH3P22223 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH3P22223 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.88■□□□□ 0.13
CDH3P22223 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.88■□□□□ 0.13
CDH3P22223 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.88■□□□□ 0.13
CDH3P22223 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH3P22223 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
CDH3P22223 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.88■□□□□ 0.13
CDH3P22223 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.88■□□□□ 0.13
CDH3P22223 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH3P22223 AC020765.3-201ENST00000613051 740 ntBASIC15.88■□□□□ 0.13
CDH3P22223 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CDH3P22223 AP001059.3-201ENST00000619053 235 ntBASIC15.88■□□□□ 0.13
CDH3P22223 AC084121.4-201ENST00000641598 221 ntBASIC15.88■□□□□ 0.13
CDH3P22223 AF228730.8-201ENST00000642140 221 ntBASIC15.88■□□□□ 0.13
CDH3P22223 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
CDH3P22223 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CDH3P22223 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH3P22223 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH3P22223 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDH3P22223 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH3P22223 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms