Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
H2AFXP16104 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
H2AFXP16104 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
H2AFXP16104 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
H2AFXP16104 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.77■□□□□ 0.27
H2AFXP16104 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.77■□□□□ 0.27
H2AFXP16104 AC027612.1-201ENST00000445234 2395 ntBASIC16.77■□□□□ 0.27
H2AFXP16104 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
H2AFXP16104 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
H2AFXP16104 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.77■□□□□ 0.27
H2AFXP16104 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.77■□□□□ 0.27
H2AFXP16104 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
H2AFXP16104 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
H2AFXP16104 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.76■□□□□ 0.27
H2AFXP16104 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.76■□□□□ 0.27
H2AFXP16104 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.76■□□□□ 0.27
H2AFXP16104 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 AC099521.3-201ENST00000624251 2938 ntBASIC16.76■□□□□ 0.27
H2AFXP16104 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.76■□□□□ 0.27
H2AFXP16104 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.76■□□□□ 0.27
H2AFXP16104 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
H2AFXP16104 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.76■□□□□ 0.27
H2AFXP16104 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.76■□□□□ 0.27
H2AFXP16104 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.76■□□□□ 0.27
H2AFXP16104 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.76■□□□□ 0.27
H2AFXP16104 VENTXP5-201ENST00000523979 775 ntBASIC16.76■□□□□ 0.27
H2AFXP16104 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.76■□□□□ 0.27
H2AFXP16104 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.76■□□□□ 0.27
H2AFXP16104 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.76■□□□□ 0.27
H2AFXP16104 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.76■□□□□ 0.27
H2AFXP16104 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.76■□□□□ 0.27
H2AFXP16104 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.76■□□□□ 0.27
H2AFXP16104 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.76■□□□□ 0.27
H2AFXP16104 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
H2AFXP16104 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.76■□□□□ 0.27
H2AFXP16104 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.76■□□□□ 0.27
H2AFXP16104 COL6A4P2-202ENST00000504443 2753 ntBASIC16.76■□□□□ 0.27
H2AFXP16104 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2AFXP16104 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.75■□□□□ 0.27
H2AFXP16104 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.75■□□□□ 0.27
H2AFXP16104 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.75■□□□□ 0.27
H2AFXP16104 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.75■□□□□ 0.27
H2AFXP16104 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
H2AFXP16104 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.75■□□□□ 0.27
H2AFXP16104 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
H2AFXP16104 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
H2AFXP16104 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
H2AFXP16104 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.75■□□□□ 0.27
H2AFXP16104 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.75■□□□□ 0.27
H2AFXP16104 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
H2AFXP16104 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.75■□□□□ 0.27
H2AFXP16104 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.75■□□□□ 0.27
H2AFXP16104 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.75■□□□□ 0.27
H2AFXP16104 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
H2AFXP16104 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.75■□□□□ 0.27
H2AFXP16104 TCAF1P1-201ENST00000414990 2232 ntBASIC16.75■□□□□ 0.27
H2AFXP16104 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
H2AFXP16104 SIGLEC16-201ENST00000599858 1437 ntBASIC16.75■□□□□ 0.27
H2AFXP16104 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.75■□□□□ 0.27
H2AFXP16104 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
H2AFXP16104 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.75■□□□□ 0.27
H2AFXP16104 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2AFXP16104 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms