Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD28P10747 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CD28P10747 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD28P10747 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC12.63□□□□□ -0.39
CD28P10747 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.63□□□□□ -0.39
CD28P10747 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD28P10747 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD28P10747 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD28P10747 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12.63□□□□□ -0.39
CD28P10747 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.63□□□□□ -0.39
CD28P10747 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CD28P10747 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.62□□□□□ -0.39
CD28P10747 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CD28P10747 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.62□□□□□ -0.39
CD28P10747 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CD28P10747 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.62□□□□□ -0.39
CD28P10747 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
CD28P10747 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.62□□□□□ -0.39
CD28P10747 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.62□□□□□ -0.39
CD28P10747 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CD28P10747 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
CD28P10747 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 SPDYE19P-201ENST00000338590 713 ntBASIC12.62□□□□□ -0.39
CD28P10747 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CD28P10747 COX5BP8-201ENST00000416911 349 ntBASIC12.62□□□□□ -0.39
CD28P10747 AL353779.1-201ENST00000434793 351 ntBASIC12.62□□□□□ -0.39
CD28P10747 KRT17P7-201ENST00000451704 1104 ntBASIC12.62□□□□□ -0.39
CD28P10747 HLA-J-202ENST00000469281 1241 ntBASIC12.62□□□□□ -0.39
CD28P10747 API5-211ENST00000534695 560 ntTSL 5 BASIC12.62□□□□□ -0.39
CD28P10747 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.62□□□□□ -0.39
CD28P10747 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.62□□□□□ -0.39
CD28P10747 AC140912.1-201ENST00000577171 1054 ntBASIC12.62□□□□□ -0.39
CD28P10747 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.62□□□□□ -0.39
CD28P10747 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.62□□□□□ -0.39
CD28P10747 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.62□□□□□ -0.39
CD28P10747 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.62□□□□□ -0.39
CD28P10747 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
CD28P10747 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.62□□□□□ -0.39
CD28P10747 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CD28P10747 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
CD28P10747 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CD28P10747 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.62□□□□□ -0.39
CD28P10747 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CD28P10747 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 AC005622.1-201ENST00000636801 1703 ntBASIC12.62□□□□□ -0.39
CD28P10747 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.62□□□□□ -0.39
CD28P10747 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.62□□□□□ -0.39
CD28P10747 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CD28P10747 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.61□□□□□ -0.39
CD28P10747 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CD28P10747 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
CD28P10747 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.61□□□□□ -0.39
CD28P10747 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
CD28P10747 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
CD28P10747 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 BTBD7P1-201ENST00000447253 1453 ntBASIC12.61□□□□□ -0.39
CD28P10747 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.61□□□□□ -0.39
CD28P10747 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 KRT8P12-202ENST00000472924 1397 ntBASIC12.61□□□□□ -0.39
CD28P10747 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD28P10747 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.61□□□□□ -0.39
CD28P10747 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms