Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 AP001282.1-201ENST00000531301 1499 ntBASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 IL9RP2-201ENST00000423948 1312 ntBASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 AC112191.1-201ENST00000523689 701 ntBASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 AP002472.1-201ENST00000577490 586 ntBASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HNRNPCL4P0DMR1 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 ZNF259P1-201ENST00000407656 1365 ntBASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 LINC00554-201ENST00000564841 3011 ntBASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 AC092384.3-202ENST00000564646 2873 ntBASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.02■□□□□ -0
HNRNPCL4P0DMR1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 AC022532.1-201ENST00000624563 1728 ntBASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HNRNPCL4P0DMR1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 AC104640.1-201ENST00000562617 2109 ntBASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 GPX1P2-201ENST00000429271 606 ntBASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 AL591424.1-201ENST00000442569 1213 ntBASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.01□□□□□ -0.01
HNRNPCL4P0DMR1 RNA5SP416-201ENST00000516838 111 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms