Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 HAUS4P1-201ENST00000406739 1145 ntBASIC17.52■□□□□ 0.4
CCDC172P0C7W6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 PAUPAR-201ENST00000630360 2965 ntBASIC17.52■□□□□ 0.4
CCDC172P0C7W6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC172P0C7W6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC172P0C7W6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC172P0C7W6 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC172P0C7W6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
CCDC172P0C7W6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC172P0C7W6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC172P0C7W6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC172P0C7W6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 AC145285.3-201ENST00000564603 959 ntBASIC17.51■□□□□ 0.39
CCDC172P0C7W6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 AC104640.1-201ENST00000562617 2109 ntBASIC17.51■□□□□ 0.39
CCDC172P0C7W6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC172P0C7W6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 HLA-A-201ENST00000376802 1334 ntBASIC17.5■□□□□ 0.39
CCDC172P0C7W6 BCAR1-209ENST00000546196 1340 ntBASIC17.5■□□□□ 0.39
CCDC172P0C7W6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC172P0C7W6 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms