Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
MMP2P08253 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MMP2P08253 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP2P08253 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
MMP2P08253 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP2P08253 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP2P08253 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
MMP2P08253 KRT8P12-202ENST00000472924 1397 ntBASIC16.17■□□□□ 0.18
MMP2P08253 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
MMP2P08253 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
MMP2P08253 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
MMP2P08253 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
MMP2P08253 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP2P08253 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.17■□□□□ 0.18
MMP2P08253 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
MMP2P08253 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.17■□□□□ 0.18
MMP2P08253 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.17■□□□□ 0.18
MMP2P08253 RPL37AP1-201ENST00000412502 279 ntBASIC16.17■□□□□ 0.18
MMP2P08253 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
MMP2P08253 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.17■□□□□ 0.18
MMP2P08253 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.17■□□□□ 0.18
MMP2P08253 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP2P08253 KLF2P3-201ENST00000451977 1087 ntBASIC16.17■□□□□ 0.18
MMP2P08253 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.17■□□□□ 0.18
MMP2P08253 MIR4313-201ENST00000580760 101 ntBASIC16.17■□□□□ 0.18
MMP2P08253 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
MMP2P08253 SPDYE12P-201ENST00000618416 771 ntBASIC16.17■□□□□ 0.18
MMP2P08253 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP2P08253 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
MMP2P08253 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP2P08253 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
MMP2P08253 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP2P08253 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP2P08253 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
MMP2P08253 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP2P08253 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP2P08253 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP2P08253 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP2P08253 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP2P08253 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MMP2P08253 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MMP2P08253 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP2P08253 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP2P08253 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP2P08253 PRAL-201ENST00000624952 3286 ntBASIC16.16■□□□□ 0.18
MMP2P08253 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP2P08253 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.16■□□□□ 0.18
MMP2P08253 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP2P08253 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP2P08253 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.16■□□□□ 0.18
MMP2P08253 AC125807.1-201ENST00000483097 614 ntBASIC16.16■□□□□ 0.18
MMP2P08253 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MMP2P08253 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP2P08253 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP2P08253 AL589739.1-201ENST00000607720 493 ntBASIC16.16■□□□□ 0.18
MMP2P08253 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.16■□□□□ 0.18
MMP2P08253 AL138828.2-201ENST00000615812 383 ntBASIC16.16■□□□□ 0.18
MMP2P08253 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP2P08253 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
MMP2P08253 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP2P08253 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MMP2P08253 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP2P08253 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP2P08253 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
MMP2P08253 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP2P08253 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP2P08253 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MMP2P08253 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
MMP2P08253 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.15■□□□□ 0.18
MMP2P08253 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP2P08253 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.15■□□□□ 0.18
MMP2P08253 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP2P08253 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MMP2P08253 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.15■□□□□ 0.18
MMP2P08253 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms