Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPRAP08240 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPRAP08240 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPRAP08240 AC063926.2-201ENST00000623766 1308 ntBASIC16.22■□□□□ 0.19
SRPRAP08240 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPRAP08240 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SRPRAP08240 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SRPRAP08240 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPRAP08240 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SRPRAP08240 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.22■□□□□ 0.19
SRPRAP08240 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPRAP08240 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SRPRAP08240 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPRAP08240 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SRPRAP08240 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SRPRAP08240 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SRPRAP08240 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.22■□□□□ 0.19
SRPRAP08240 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.22■□□□□ 0.19
SRPRAP08240 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.22■□□□□ 0.19
SRPRAP08240 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.22■□□□□ 0.19
SRPRAP08240 AC055876.2-201ENST00000531834 546 ntBASIC16.22■□□□□ 0.19
SRPRAP08240 TPRX2P-201ENST00000535362 881 ntBASIC16.22■□□□□ 0.19
SRPRAP08240 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.22■□□□□ 0.19
SRPRAP08240 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
SRPRAP08240 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.22■□□□□ 0.19
SRPRAP08240 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.22■□□□□ 0.19
SRPRAP08240 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.22■□□□□ 0.19
SRPRAP08240 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
SRPRAP08240 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPRAP08240 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SRPRAP08240 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPRAP08240 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPRAP08240 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPRAP08240 SLC7A15P-201ENST00000424028 1363 ntBASIC16.22■□□□□ 0.19
SRPRAP08240 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SRPRAP08240 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SRPRAP08240 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.22■□□□□ 0.19
SRPRAP08240 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.22■□□□□ 0.19
SRPRAP08240 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPRAP08240 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SRPRAP08240 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRPRAP08240 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SRPRAP08240 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SRPRAP08240 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.21■□□□□ 0.19
SRPRAP08240 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRPRAP08240 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRPRAP08240 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRPRAP08240 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRPRAP08240 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.21■□□□□ 0.19
SRPRAP08240 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.21■□□□□ 0.19
SRPRAP08240 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRPRAP08240 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.21■□□□□ 0.19
SRPRAP08240 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SRPRAP08240 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRPRAP08240 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRPRAP08240 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRPRAP08240 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.21■□□□□ 0.19
SRPRAP08240 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.21■□□□□ 0.19
SRPRAP08240 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.21■□□□□ 0.19
SRPRAP08240 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.21■□□□□ 0.19
SRPRAP08240 AL596325.1-201ENST00000563991 1082 ntBASIC16.21■□□□□ 0.19
SRPRAP08240 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.21■□□□□ 0.19
SRPRAP08240 AC099568.2-201ENST00000609194 695 ntBASIC16.21■□□□□ 0.19
SRPRAP08240 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SRPRAP08240 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.21■□□□□ 0.19
SRPRAP08240 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRPRAP08240 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRPRAP08240 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SRPRAP08240 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SRPRAP08240 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRPRAP08240 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRPRAP08240 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRPRAP08240 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRPRAP08240 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRPRAP08240 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRPRAP08240 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SRPRAP08240 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SRPRAP08240 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SRPRAP08240 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SRPRAP08240 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SRPRAP08240 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
SRPRAP08240 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.2■□□□□ 0.18
SRPRAP08240 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
SRPRAP08240 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SRPRAP08240 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.2■□□□□ 0.18
SRPRAP08240 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPRAP08240 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.2■□□□□ 0.18
SRPRAP08240 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPRAP08240 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPRAP08240 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPRAP08240 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPRAP08240 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.2■□□□□ 0.18
SRPRAP08240 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRPRAP08240 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SRPRAP08240 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRPRAP08240 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.2■□□□□ 0.18
SRPRAP08240 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRPRAP08240 AC005034.1-201ENST00000426657 489 ntBASIC16.2■□□□□ 0.18
SRPRAP08240 GAPDHP21-201ENST00000450301 1010 ntBASIC16.2■□□□□ 0.18
SRPRAP08240 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms