Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.08■□□□□ 0.32
ZBED1O96006 AC027796.2-201ENST00000575326 344 ntBASIC17.08■□□□□ 0.32
ZBED1O96006 AC106028.4-201ENST00000614509 607 ntBASIC17.08■□□□□ 0.32
ZBED1O96006 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZBED1O96006 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ZBED1O96006 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ZBED1O96006 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZBED1O96006 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.08■□□□□ 0.32
ZBED1O96006 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZBED1O96006 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZBED1O96006 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZBED1O96006 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZBED1O96006 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.08■□□□□ 0.32
ZBED1O96006 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.07■□□□□ 0.32
ZBED1O96006 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ZBED1O96006 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZBED1O96006 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ZBED1O96006 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.07■□□□□ 0.32
ZBED1O96006 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
ZBED1O96006 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.07■□□□□ 0.32
ZBED1O96006 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZBED1O96006 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.07■□□□□ 0.32
ZBED1O96006 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZBED1O96006 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ZBED1O96006 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZBED1O96006 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZBED1O96006 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZBED1O96006 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.07■□□□□ 0.32
ZBED1O96006 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.07■□□□□ 0.32
ZBED1O96006 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.07■□□□□ 0.32
ZBED1O96006 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZBED1O96006 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.07■□□□□ 0.32
ZBED1O96006 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
ZBED1O96006 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.07■□□□□ 0.32
ZBED1O96006 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.07■□□□□ 0.32
ZBED1O96006 AC051619.7-201ENST00000568314 623 ntBASIC17.07■□□□□ 0.32
ZBED1O96006 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.07■□□□□ 0.32
ZBED1O96006 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.07■□□□□ 0.32
ZBED1O96006 MIR4321-201ENST00000592276 80 ntBASIC17.07■□□□□ 0.32
ZBED1O96006 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZBED1O96006 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZBED1O96006 AC007967.4-201ENST00000614700 386 ntBASIC17.07■□□□□ 0.32
ZBED1O96006 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
ZBED1O96006 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ZBED1O96006 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZBED1O96006 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZBED1O96006 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZBED1O96006 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZBED1O96006 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.07■□□□□ 0.32
ZBED1O96006 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZBED1O96006 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.07■□□□□ 0.32
ZBED1O96006 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.07■□□□□ 0.32
ZBED1O96006 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZBED1O96006 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZBED1O96006 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZBED1O96006 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZBED1O96006 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.07■□□□□ 0.32
ZBED1O96006 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ZBED1O96006 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.07■□□□□ 0.32
ZBED1O96006 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.07■□□□□ 0.32
ZBED1O96006 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZBED1O96006 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZBED1O96006 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZBED1O96006 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZBED1O96006 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZBED1O96006 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.06■□□□□ 0.32
ZBED1O96006 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ZBED1O96006 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZBED1O96006 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ZBED1O96006 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.06■□□□□ 0.32
ZBED1O96006 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZBED1O96006 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZBED1O96006 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZBED1O96006 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZBED1O96006 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZBED1O96006 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZBED1O96006 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZBED1O96006 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZBED1O96006 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ZBED1O96006 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZBED1O96006 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.06■□□□□ 0.32
ZBED1O96006 KLF2P3-201ENST00000451977 1087 ntBASIC17.06■□□□□ 0.32
ZBED1O96006 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.06■□□□□ 0.32
ZBED1O96006 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.06■□□□□ 0.32
ZBED1O96006 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.06■□□□□ 0.32
ZBED1O96006 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.06■□□□□ 0.32
ZBED1O96006 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
ZBED1O96006 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZBED1O96006 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZBED1O96006 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.06■□□□□ 0.32
ZBED1O96006 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ZBED1O96006 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ZBED1O96006 AC006449.6-201ENST00000612330 2296 ntBASIC17.05■□□□□ 0.32
ZBED1O96006 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ZBED1O96006 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
ZBED1O96006 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZBED1O96006 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms