Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX6O95503 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX6O95503 PKD1P5-201ENST00000532415 10291 ntBASIC16.18■□□□□ 0.18
CBX6O95503 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CBX6O95503 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CBX6O95503 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CBX6O95503 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.18■□□□□ 0.18
CBX6O95503 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.18■□□□□ 0.18
CBX6O95503 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX6O95503 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX6O95503 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX6O95503 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.18■□□□□ 0.18
CBX6O95503 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.18■□□□□ 0.18
CBX6O95503 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CBX6O95503 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CBX6O95503 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.18■□□□□ 0.18
CBX6O95503 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.18■□□□□ 0.18
CBX6O95503 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.18■□□□□ 0.18
CBX6O95503 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CBX6O95503 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CBX6O95503 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CBX6O95503 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX6O95503 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX6O95503 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.17■□□□□ 0.18
CBX6O95503 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.17■□□□□ 0.18
CBX6O95503 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CBX6O95503 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.17■□□□□ 0.18
CBX6O95503 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX6O95503 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX6O95503 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.17■□□□□ 0.18
CBX6O95503 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CBX6O95503 AP002414.1-201ENST00000391405 1147 ntBASIC16.17■□□□□ 0.18
CBX6O95503 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.17■□□□□ 0.18
CBX6O95503 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.17■□□□□ 0.18
CBX6O95503 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.17■□□□□ 0.18
CBX6O95503 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CBX6O95503 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.17■□□□□ 0.18
CBX6O95503 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.17■□□□□ 0.18
CBX6O95503 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.17■□□□□ 0.18
CBX6O95503 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.17■□□□□ 0.18
CBX6O95503 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.17■□□□□ 0.18
CBX6O95503 NKAPP1-205ENST00000585790 367 ntBASIC16.17■□□□□ 0.18
CBX6O95503 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CBX6O95503 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX6O95503 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
CBX6O95503 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX6O95503 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CBX6O95503 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX6O95503 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CBX6O95503 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CBX6O95503 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX6O95503 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.17■□□□□ 0.18
CBX6O95503 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CBX6O95503 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX6O95503 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX6O95503 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CBX6O95503 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX6O95503 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX6O95503 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.16■□□□□ 0.18
CBX6O95503 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX6O95503 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.16■□□□□ 0.18
CBX6O95503 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CBX6O95503 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX6O95503 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.16■□□□□ 0.18
CBX6O95503 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.16■□□□□ 0.18
CBX6O95503 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.16■□□□□ 0.18
CBX6O95503 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX6O95503 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.16■□□□□ 0.18
CBX6O95503 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CBX6O95503 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.16■□□□□ 0.18
CBX6O95503 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.16■□□□□ 0.18
CBX6O95503 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CBX6O95503 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.16■□□□□ 0.18
CBX6O95503 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.16■□□□□ 0.18
CBX6O95503 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CBX6O95503 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CBX6O95503 MTDHP4-201ENST00000600287 670 ntBASIC16.16■□□□□ 0.18
CBX6O95503 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.16■□□□□ 0.18
CBX6O95503 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX6O95503 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.16■□□□□ 0.18
CBX6O95503 AC107918.4-202ENST00000641623 219 ntBASIC16.16■□□□□ 0.18
CBX6O95503 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX6O95503 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CBX6O95503 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.16■□□□□ 0.18
CBX6O95503 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX6O95503 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.16■□□□□ 0.18
CBX6O95503 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CBX6O95503 CICP4-201ENST00000447359 2812 ntBASIC16.16■□□□□ 0.18
CBX6O95503 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
CBX6O95503 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CBX6O95503 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.16■□□□□ 0.18
CBX6O95503 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.16■□□□□ 0.18
CBX6O95503 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CBX6O95503 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CBX6O95503 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CBX6O95503 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.15■□□□□ 0.18
CBX6O95503 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CBX6O95503 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CBX6O95503 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CBX6O95503 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms