Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC10.91□□□□□ -0.66
SNCGO76070 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
SNCGO76070 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC10.9□□□□□ -0.66
SNCGO76070 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC10.9□□□□□ -0.66
SNCGO76070 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 GALC-206ENST00000544807 2528 ntTSL 2 BASIC10.9□□□□□ -0.66
SNCGO76070 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC10.9□□□□□ -0.66
SNCGO76070 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC10.9□□□□□ -0.66
SNCGO76070 DAPK2-213ENST00000612884 8086 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC10.9□□□□□ -0.66
SNCGO76070 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
SNCGO76070 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC10.9□□□□□ -0.66
SNCGO76070 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC10.9□□□□□ -0.66
SNCGO76070 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC10.9□□□□□ -0.66
SNCGO76070 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC10.9□□□□□ -0.66
SNCGO76070 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 AL138781.1-201ENST00000566567 1274 ntBASIC10.9□□□□□ -0.66
SNCGO76070 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC10.9□□□□□ -0.66
SNCGO76070 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
SNCGO76070 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC10.9□□□□□ -0.66
SNCGO76070 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.66
SNCGO76070 HERC2P9-206ENST00000529624 5187 ntBASIC10.9□□□□□ -0.66
SNCGO76070 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC10.9□□□□□ -0.66
SNCGO76070 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC10.9□□□□□ -0.66
SNCGO76070 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC10.9□□□□□ -0.66
SNCGO76070 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC10.9□□□□□ -0.66
SNCGO76070 AC005912.2-201ENST00000619492 2400 ntBASIC10.9□□□□□ -0.66
SNCGO76070 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
SNCGO76070 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
SNCGO76070 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC10.9□□□□□ -0.66
SNCGO76070 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
SNCGO76070 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 AC006486.2-201ENST00000624246 2199 ntBASIC10.9□□□□□ -0.66
SNCGO76070 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC10.9□□□□□ -0.66
SNCGO76070 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC10.9□□□□□ -0.66
SNCGO76070 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SNCGO76070 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
SNCGO76070 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SNCGO76070 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
SNCGO76070 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC10.9□□□□□ -0.67
SNCGO76070 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SNCGO76070 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SNCGO76070 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SNCGO76070 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SNCGO76070 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SNCGO76070 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
SNCGO76070 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
SNCGO76070 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
SNCGO76070 AC002310.6-201ENST00000624451 1377 ntBASIC10.9□□□□□ -0.67
SNCGO76070 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SNCGO76070 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
SNCGO76070 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
SNCGO76070 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 PTCHD1-201ENST00000379361 13714 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 SCN5A-202ENST00000333535 8456 ntAPPRIS P5 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
SNCGO76070 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC10.89□□□□□ -0.67
SNCGO76070 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC10.89□□□□□ -0.67
SNCGO76070 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SNCGO76070 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SNCGO76070 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SNCGO76070 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SNCGO76070 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms