Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCN2BO60939 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.33■□□□□ 0.04
SCN2BO60939 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.32■□□□□ 0.04
SCN2BO60939 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.32■□□□□ 0.04
SCN2BO60939 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SCN2BO60939 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.32■□□□□ 0.04
SCN2BO60939 SSR4P1-203ENST00000599569 2260 ntBASIC15.32■□□□□ 0.04
SCN2BO60939 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SCN2BO60939 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.32■□□□□ 0.04
SCN2BO60939 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.32■□□□□ 0.04
SCN2BO60939 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
SCN2BO60939 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.32■□□□□ 0.04
SCN2BO60939 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SCN2BO60939 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.32■□□□□ 0.04
SCN2BO60939 AC064836.3-201ENST00000607928 673 ntBASIC15.32■□□□□ 0.04
SCN2BO60939 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.32■□□□□ 0.04
SCN2BO60939 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.32■□□□□ 0.04
SCN2BO60939 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.32■□□□□ 0.04
SCN2BO60939 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.32■□□□□ 0.04
SCN2BO60939 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SCN2BO60939 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.32■□□□□ 0.04
SCN2BO60939 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCN2BO60939 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.32■□□□□ 0.04
SCN2BO60939 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.32■□□□□ 0.04
SCN2BO60939 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SCN2BO60939 AC020658.6-201ENST00000623564 1870 ntBASIC15.31■□□□□ 0.04
SCN2BO60939 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SCN2BO60939 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SCN2BO60939 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
SCN2BO60939 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SCN2BO60939 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.31■□□□□ 0.04
SCN2BO60939 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.31■□□□□ 0.04
SCN2BO60939 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SCN2BO60939 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SCN2BO60939 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.31■□□□□ 0.04
SCN2BO60939 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.31■□□□□ 0.04
SCN2BO60939 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.31■□□□□ 0.04
SCN2BO60939 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.31■□□□□ 0.04
SCN2BO60939 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.31■□□□□ 0.04
SCN2BO60939 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.31■□□□□ 0.04
SCN2BO60939 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.31■□□□□ 0.04
SCN2BO60939 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SCN2BO60939 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.31■□□□□ 0.04
SCN2BO60939 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.31■□□□□ 0.04
SCN2BO60939 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.31■□□□□ 0.04
SCN2BO60939 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 WASH6P-202ENST00000359512 1437 ntBASIC15.31■□□□□ 0.04
SCN2BO60939 AC104109.2-201ENST00000602919 1418 ntBASIC15.31■□□□□ 0.04
SCN2BO60939 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.31■□□□□ 0.04
SCN2BO60939 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.31■□□□□ 0.04
SCN2BO60939 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SCN2BO60939 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SCN2BO60939 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SCN2BO60939 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.31■□□□□ 0.04
SCN2BO60939 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
SCN2BO60939 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SCN2BO60939 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.31■□□□□ 0.04
SCN2BO60939 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.31■□□□□ 0.04
SCN2BO60939 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms