Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.41□□□□□ -0.1
PFDN1O60925 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PFDN1O60925 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.4□□□□□ -0.1
PFDN1O60925 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.4□□□□□ -0.1
PFDN1O60925 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PFDN1O60925 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.4□□□□□ -0.1
PFDN1O60925 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.4□□□□□ -0.1
PFDN1O60925 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PFDN1O60925 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PFDN1O60925 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PFDN1O60925 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.4□□□□□ -0.1
PFDN1O60925 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.4□□□□□ -0.1
PFDN1O60925 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
PFDN1O60925 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PFDN1O60925 C1QL1P1-201ENST00000568105 661 ntBASIC14.4□□□□□ -0.1
PFDN1O60925 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.4□□□□□ -0.1
PFDN1O60925 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.4□□□□□ -0.1
PFDN1O60925 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
PFDN1O60925 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.4□□□□□ -0.1
PFDN1O60925 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PFDN1O60925 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PFDN1O60925 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
PFDN1O60925 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
PFDN1O60925 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.4□□□□□ -0.1
PFDN1O60925 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
PFDN1O60925 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
PFDN1O60925 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.4□□□□□ -0.1
PFDN1O60925 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.4□□□□□ -0.1
PFDN1O60925 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN1O60925 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.4□□□□□ -0.1
PFDN1O60925 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.4□□□□□ -0.11
PFDN1O60925 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
PFDN1O60925 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.39□□□□□ -0.11
PFDN1O60925 GGT3P-204ENST00000453783 1664 ntBASIC14.39□□□□□ -0.11
PFDN1O60925 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PFDN1O60925 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.39□□□□□ -0.11
PFDN1O60925 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PFDN1O60925 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 AC106818.1-201ENST00000623223 3242 ntBASIC14.39□□□□□ -0.11
PFDN1O60925 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.39□□□□□ -0.11
PFDN1O60925 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.39□□□□□ -0.11
PFDN1O60925 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.39□□□□□ -0.11
PFDN1O60925 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.39□□□□□ -0.11
PFDN1O60925 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.39□□□□□ -0.11
PFDN1O60925 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.39□□□□□ -0.11
PFDN1O60925 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PFDN1O60925 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
PFDN1O60925 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 C18orf15-201ENST00000623680 2534 ntBASIC14.39□□□□□ -0.11
PFDN1O60925 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN1O60925 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PFDN1O60925 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC14.38□□□□□ -0.11
PFDN1O60925 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.38□□□□□ -0.11
PFDN1O60925 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.38□□□□□ -0.11
PFDN1O60925 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms