Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RIPK2O43353 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.42■□□□□ 0.22
RIPK2O43353 AC026748.1-201ENST00000624349 3251 ntBASIC16.42■□□□□ 0.22
RIPK2O43353 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
RIPK2O43353 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIPK2O43353 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIPK2O43353 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIPK2O43353 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIPK2O43353 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.42■□□□□ 0.22
RIPK2O43353 PMS2P4-201ENST00000412466 1052 ntBASIC16.42■□□□□ 0.22
RIPK2O43353 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
RIPK2O43353 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RIPK2O43353 AC136632.2-201ENST00000512891 861 ntBASIC16.42■□□□□ 0.22
RIPK2O43353 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.42■□□□□ 0.22
RIPK2O43353 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.42■□□□□ 0.22
RIPK2O43353 OR7E47P-204ENST00000575924 449 ntBASIC16.42■□□□□ 0.22
RIPK2O43353 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.42■□□□□ 0.22
RIPK2O43353 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.42■□□□□ 0.22
RIPK2O43353 AL365330.1-201ENST00000607459 531 ntBASIC16.42■□□□□ 0.22
RIPK2O43353 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.42■□□□□ 0.22
RIPK2O43353 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RIPK2O43353 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RIPK2O43353 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIPK2O43353 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.42■□□□□ 0.22
RIPK2O43353 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIPK2O43353 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIPK2O43353 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIPK2O43353 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.42■□□□□ 0.22
RIPK2O43353 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIPK2O43353 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RIPK2O43353 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIPK2O43353 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RIPK2O43353 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RIPK2O43353 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RIPK2O43353 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RIPK2O43353 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.41■□□□□ 0.22
RIPK2O43353 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RIPK2O43353 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RIPK2O43353 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.41■□□□□ 0.22
RIPK2O43353 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.41■□□□□ 0.22
RIPK2O43353 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RIPK2O43353 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.41■□□□□ 0.22
RIPK2O43353 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RIPK2O43353 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RIPK2O43353 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.41■□□□□ 0.22
RIPK2O43353 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RIPK2O43353 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RIPK2O43353 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RIPK2O43353 AP002469.2-201ENST00000531724 424 ntBASIC16.41■□□□□ 0.22
RIPK2O43353 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
RIPK2O43353 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.41■□□□□ 0.22
RIPK2O43353 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RIPK2O43353 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.41■□□□□ 0.22
RIPK2O43353 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RIPK2O43353 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RIPK2O43353 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.41■□□□□ 0.22
RIPK2O43353 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.41■□□□□ 0.22
RIPK2O43353 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RIPK2O43353 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.41■□□□□ 0.22
RIPK2O43353 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
RIPK2O43353 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.41■□□□□ 0.22
RIPK2O43353 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RIPK2O43353 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RIPK2O43353 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.4■□□□□ 0.22
RIPK2O43353 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RIPK2O43353 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.4■□□□□ 0.22
RIPK2O43353 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RIPK2O43353 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RIPK2O43353 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RIPK2O43353 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RIPK2O43353 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RIPK2O43353 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.4■□□□□ 0.22
RIPK2O43353 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.4■□□□□ 0.22
RIPK2O43353 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RIPK2O43353 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RIPK2O43353 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
RIPK2O43353 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RIPK2O43353 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.4■□□□□ 0.22
RIPK2O43353 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.4■□□□□ 0.22
RIPK2O43353 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.4■□□□□ 0.22
RIPK2O43353 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RIPK2O43353 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.4■□□□□ 0.22
RIPK2O43353 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.4■□□□□ 0.22
RIPK2O43353 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.4■□□□□ 0.22
RIPK2O43353 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.4■□□□□ 0.22
RIPK2O43353 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RIPK2O43353 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.4■□□□□ 0.22
RIPK2O43353 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.4■□□□□ 0.22
RIPK2O43353 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RIPK2O43353 AP001282.1-201ENST00000531301 1499 ntBASIC16.4■□□□□ 0.22
RIPK2O43353 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.4■□□□□ 0.22
RIPK2O43353 AC134407.2-201ENST00000625089 1978 ntBASIC16.4■□□□□ 0.22
RIPK2O43353 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RIPK2O43353 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RIPK2O43353 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.4■□□□□ 0.22
RIPK2O43353 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RIPK2O43353 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RIPK2O43353 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RIPK2O43353 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RIPK2O43353 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms