Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASQ2O14958 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASQ2O14958 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CASQ2O14958 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
CASQ2O14958 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.38■□□□□ 0.05
CASQ2O14958 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.38■□□□□ 0.05
CASQ2O14958 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.38■□□□□ 0.05
CASQ2O14958 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.38■□□□□ 0.05
CASQ2O14958 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.38■□□□□ 0.05
CASQ2O14958 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.38■□□□□ 0.05
CASQ2O14958 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.38■□□□□ 0.05
CASQ2O14958 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.38■□□□□ 0.05
CASQ2O14958 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.38■□□□□ 0.05
CASQ2O14958 AC041040.2-201ENST00000622926 2899 ntBASIC15.38■□□□□ 0.05
CASQ2O14958 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
CASQ2O14958 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.38■□□□□ 0.05
CASQ2O14958 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CASQ2O14958 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CASQ2O14958 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CASQ2O14958 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.38■□□□□ 0.05
CASQ2O14958 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CASQ2O14958 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.37■□□□□ 0.05
CASQ2O14958 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CASQ2O14958 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.37■□□□□ 0.05
CASQ2O14958 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 MROH4P-201ENST00000431302 1578 ntBASIC15.37■□□□□ 0.05
CASQ2O14958 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.37■□□□□ 0.05
CASQ2O14958 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CASQ2O14958 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
CASQ2O14958 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.37■□□□□ 0.05
CASQ2O14958 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.37■□□□□ 0.05
CASQ2O14958 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.37■□□□□ 0.05
CASQ2O14958 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CASQ2O14958 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.37■□□□□ 0.05
CASQ2O14958 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.37■□□□□ 0.05
CASQ2O14958 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.37■□□□□ 0.05
CASQ2O14958 AL590326.2-201ENST00000625139 305 ntBASIC15.37■□□□□ 0.05
CASQ2O14958 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.37■□□□□ 0.05
CASQ2O14958 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.37■□□□□ 0.05
CASQ2O14958 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.37■□□□□ 0.05
CASQ2O14958 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CASQ2O14958 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.37■□□□□ 0.05
CASQ2O14958 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.37■□□□□ 0.05
CASQ2O14958 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.37■□□□□ 0.05
CASQ2O14958 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.37■□□□□ 0.05
CASQ2O14958 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CASQ2O14958 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CASQ2O14958 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CASQ2O14958 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CASQ2O14958 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.36■□□□□ 0.05
CASQ2O14958 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
CASQ2O14958 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CASQ2O14958 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.36■□□□□ 0.05
CASQ2O14958 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CASQ2O14958 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CASQ2O14958 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CASQ2O14958 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CASQ2O14958 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CASQ2O14958 AL137784.3-201ENST00000623858 2288 ntBASIC15.36■□□□□ 0.05
CASQ2O14958 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CASQ2O14958 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
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