Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 AC114341.1-201ENST00000618070 349 ntBASIC11.38□□□□□ -0.59
LINC01546A6NGU7 AL589182.2-201ENST00000619332 1049 ntBASIC11.38□□□□□ -0.59
LINC01546A6NGU7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC01546A6NGU7 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 AC129492.6-201ENST00000611383 1305 ntBASIC11.37□□□□□ -0.59
LINC01546A6NGU7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 AC117947.1-201ENST00000427448 529 ntBASIC11.37□□□□□ -0.59
LINC01546A6NGU7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 ATP5G1P1-201ENST00000448724 379 ntBASIC11.37□□□□□ -0.59
LINC01546A6NGU7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 MIR4313-201ENST00000580760 101 ntBASIC11.37□□□□□ -0.59
LINC01546A6NGU7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 AC011498.5-201ENST00000592027 486 ntBASIC11.37□□□□□ -0.59
LINC01546A6NGU7 MIR4321-201ENST00000592276 80 ntBASIC11.37□□□□□ -0.59
LINC01546A6NGU7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 AC021097.1-201ENST00000607902 574 ntBASIC11.37□□□□□ -0.59
LINC01546A6NGU7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC01546A6NGU7 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01546A6NGU7 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms