Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCDC162PA2VCL2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC162PA2VCL2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 RPSAP43-201ENST00000402237 625 ntBASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 KRT8P23-201ENST00000560090 1207 ntBASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 AC061975.2-201ENST00000581722 295 ntBASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 AC022145.2-201ENST00000598203 171 ntBASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC162PA2VCL2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 SLC25A39P2-201ENST00000537614 270 ntBASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 AC023824.1-201ENST00000562945 2975 ntBASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 MIR3687-2-201ENST00000577708 61 ntBASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 MIR3687-1-201ENST00000614492 61 ntBASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCDC162PA2VCL2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms