Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 PTCHD3P3-201ENST00000403073 906 ntBASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 AP000867.3-201ENST00000524675 377 ntBASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 NKAPP1-205ENST00000585790 367 ntBASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 AC099336.1-202ENST00000602961 463 ntBASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 AL591684.3-201ENST00000605187 298 ntBASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 AP001269.4-201ENST00000609611 512 ntBASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 AL121956.5-201ENST00000625261 221 ntBASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 CICP24-201ENST00000605464 2705 ntBASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 SNX18-202ENST00000343017 3140 ntBASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV18A0A075B6X5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV18A0A075B6X5 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV18A0A075B6X5 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.93□□□□□ -0.18
TRAV18A0A075B6X5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV18A0A075B6X5 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV18A0A075B6X5 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV18A0A075B6X5 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV18A0A075B6X5 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms