Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 SAPCD2P3-201ENST00000455031 850 ntBASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 SART3-203ENST00000546611 1184 ntBASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 AC138969.2-201ENST00000532739 9932 ntBASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.15□□□□□ -0.15
PCDHB16Q9NRJ7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 REXO1L6P-202ENST00000619970 1078 ntBASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 MIR1199-201ENST00000621445 119 ntBASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 AC107918.4-202ENST00000641623 219 ntBASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHB16Q9NRJ7 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHB16Q9NRJ7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.13□□□□□ -0.15
PCDHB16Q9NRJ7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHB16Q9NRJ7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHB16Q9NRJ7 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHB16Q9NRJ7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHB16Q9NRJ7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHB16Q9NRJ7 GRK6P1-201ENST00000400595 1711 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms