Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AC004461.1-201ENST00000412461 403 ntBASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 AC254562.1-201ENST00000417586 456 ntBASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 AC079140.1-201ENST00000508039 487 ntBASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 AP001160.2-201ENST00000596071 487 ntBASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NECTIN3Q9NQS3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 CNN2P11-201ENST00000429351 262 ntBASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 KRT18P34-201ENST00000488218 1270 ntBASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 SNHG9-202ENST00000564014 471 ntBASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 AC079781.4-201ENST00000641908 219 ntBASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 AC068587.6-202ENST00000641839 5619 ntBASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NECTIN3Q9NQS3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 SPCS2P4-201ENST00000436160 681 ntBASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 RN7SL589P-201ENST00000481268 310 ntBASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 AP000344.2-201ENST00000512987 629 ntBASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NECTIN3Q9NQS3 AL138918.1-201ENST00000568306 659 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms