Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 GUSBP12-201ENST00000513727 720 ntBASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 AC009533.2-201ENST00000543664 586 ntBASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 AL359075.1-203ENST00000462729 1002 ntBASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 AL138966.2-201ENST00000621997 464 ntBASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 REXO1L3P-201ENST00000622202 1288 ntBASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 PKD1P5-201ENST00000532415 10291 ntBASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SLIRPQ9GZT3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
SLIRPQ9GZT3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.21□□□□□ -0.14
SLIRPQ9GZT3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
SLIRPQ9GZT3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
SLIRPQ9GZT3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLIRPQ9GZT3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SLIRPQ9GZT3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.14
SLIRPQ9GZT3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLIRPQ9GZT3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLIRPQ9GZT3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 SPDYE21P-201ENST00000413323 827 ntBASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms