Protein–RNA interactions for Protein: Q9C0H5

ARHGAP39, Rho GTPase-activating protein 39, humanhuman

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP39Q9C0H5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ARHGAP39Q9C0H5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18■□□□□ 0.47
ARHGAP39Q9C0H5 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ARHGAP39Q9C0H5 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ARHGAP39Q9C0H5 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ARHGAP39Q9C0H5 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
ARHGAP39Q9C0H5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ARHGAP39Q9C0H5 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18■□□□□ 0.47
ARHGAP39Q9C0H5 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18■□□□□ 0.47
ARHGAP39Q9C0H5 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 DRD5P1-201ENST00000456605 1438 ntBASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 NEFHP1-201ENST00000412845 2629 ntBASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 AL451050.2-201ENST00000606967 682 ntBASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 KRT8P19-201ENST00000551916 1455 ntBASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARHGAP39Q9C0H5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 IMP3P2-201ENST00000489760 475 ntBASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 AC000095.1-201ENST00000603208 874 ntBASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 AC145423.3-201ENST00000615987 467 ntBASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 AC141586.5-201ENST00000624546 2050 ntBASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 AL121723.1-201ENST00000445194 1519 ntBASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.98■□□□□ 0.47
ARHGAP39Q9C0H5 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ARHGAP39Q9C0H5 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.97■□□□□ 0.47
ARHGAP39Q9C0H5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGAP39Q9C0H5 PCDHB18P-201ENST00000524813 2368 ntBASIC17.97■□□□□ 0.47
ARHGAP39Q9C0H5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGAP39Q9C0H5 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.97■□□□□ 0.47
ARHGAP39Q9C0H5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGAP39Q9C0H5 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGAP39Q9C0H5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGAP39Q9C0H5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGAP39Q9C0H5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGAP39Q9C0H5 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.97■□□□□ 0.47
ARHGAP39Q9C0H5 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.97■□□□□ 0.47
ARHGAP39Q9C0H5 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGAP39Q9C0H5 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
ARHGAP39Q9C0H5 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.97■□□□□ 0.47
ARHGAP39Q9C0H5 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGAP39Q9C0H5 LDHBP1-201ENST00000455730 1119 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms