Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.52□□□□□ -0.25
SSBP3Q9BWW4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 MTND6P24-201ENST00000440466 518 ntBASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 AL512638.1-201ENST00000457493 794 ntBASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 INGX-202ENST00000489074 768 ntBASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 AC092364.2-202ENST00000597012 1073 ntBASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 AL390955.2-201ENST00000603032 514 ntBASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 AL096865.1-201ENST00000606796 927 ntBASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 AC026979.3-201ENST00000607315 403 ntBASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 AL365330.1-201ENST00000607459 531 ntBASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 LINC00554-201ENST00000564841 3011 ntBASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP3Q9BWW4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP3Q9BWW4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms