Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 AC006058.4-201ENST00000624016 1670 ntBASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 CXCL1P1-201ENST00000502804 216 ntBASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 RNA5SP415-201ENST00000517246 115 ntBASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 IGHV3-22-201ENST00000520721 359 ntBASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 AC012569.1-201ENST00000591191 1524 ntBASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHRDL1Q9BU40 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 AC022532.1-201ENST00000624563 1728 ntBASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 METTL26-205ENST00000397666 726 ntTSL 2 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 VN2R19P-201ENST00000442399 1052 ntBASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHRDL1Q9BU40 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms