Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.17□□□□□ -0.3
RAB40CQ96S21 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB40CQ96S21 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB40CQ96S21 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 AC007292.2-201ENST00000593524 1812 ntBASIC13.16□□□□□ -0.3
RAB40CQ96S21 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 HAUS4P1-201ENST00000406739 1145 ntBASIC13.16□□□□□ -0.3
RAB40CQ96S21 UPK3BP1-201ENST00000428678 509 ntBASIC13.16□□□□□ -0.3
RAB40CQ96S21 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 TOB2P1-201ENST00000469761 992 ntBASIC13.16□□□□□ -0.3
RAB40CQ96S21 BX005266.1-201ENST00000473402 457 ntBASIC13.16□□□□□ -0.3
RAB40CQ96S21 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 AC092329.2-201ENST00000598402 547 ntBASIC13.16□□□□□ -0.3
RAB40CQ96S21 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
RAB40CQ96S21 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB40CQ96S21 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 AC026396.1-201ENST00000419388 421 ntBASIC13.15□□□□□ -0.3
RAB40CQ96S21 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 ATP5G2P1-201ENST00000433580 426 ntBASIC13.15□□□□□ -0.3
RAB40CQ96S21 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 AC092119.3-201ENST00000612618 583 ntBASIC13.15□□□□□ -0.3
RAB40CQ96S21 NPAP1P7-201ENST00000613027 823 ntBASIC13.15□□□□□ -0.3
RAB40CQ96S21 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 PI4KAP1-204ENST00000612579 1703 ntBASIC13.15□□□□□ -0.3
RAB40CQ96S21 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms