Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.37■□□□□ 0.05
BBS4Q96RK4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.37■□□□□ 0.05
BBS4Q96RK4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.37■□□□□ 0.05
BBS4Q96RK4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.37■□□□□ 0.05
BBS4Q96RK4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.37■□□□□ 0.05
BBS4Q96RK4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.37■□□□□ 0.05
BBS4Q96RK4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.37■□□□□ 0.05
BBS4Q96RK4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
BBS4Q96RK4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
BBS4Q96RK4 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
BBS4Q96RK4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
BBS4Q96RK4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.37■□□□□ 0.05
BBS4Q96RK4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
BBS4Q96RK4 AKAP8P1-201ENST00000434743 1349 ntBASIC15.37■□□□□ 0.05
BBS4Q96RK4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.37■□□□□ 0.05
BBS4Q96RK4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
BBS4Q96RK4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
BBS4Q96RK4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
BBS4Q96RK4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.37■□□□□ 0.05
BBS4Q96RK4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
BBS4Q96RK4 AC010491.1-201ENST00000563101 2797 ntBASIC15.36■□□□□ 0.05
BBS4Q96RK4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
BBS4Q96RK4 TFAMP1-201ENST00000412727 736 ntBASIC15.36■□□□□ 0.05
BBS4Q96RK4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.36■□□□□ 0.05
BBS4Q96RK4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
BBS4Q96RK4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
BBS4Q96RK4 FAM86C2P-203ENST00000528684 1004 ntBASIC15.36■□□□□ 0.05
BBS4Q96RK4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
BBS4Q96RK4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
BBS4Q96RK4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
BBS4Q96RK4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.36■□□□□ 0.05
BBS4Q96RK4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.36■□□□□ 0.05
BBS4Q96RK4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
BBS4Q96RK4 AL589702.1-201ENST00000641229 1509 ntBASIC15.36■□□□□ 0.05
BBS4Q96RK4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
BBS4Q96RK4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.36■□□□□ 0.05
BBS4Q96RK4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.36■□□□□ 0.05
BBS4Q96RK4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.36■□□□□ 0.05
BBS4Q96RK4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
BBS4Q96RK4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 AL355306.1-201ENST00000415580 579 ntBASIC15.35■□□□□ 0.05
BBS4Q96RK4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 AL135744.1-201ENST00000565098 629 ntBASIC15.35■□□□□ 0.05
BBS4Q96RK4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 LINC02447-202ENST00000501888 2146 ntBASIC15.35■□□□□ 0.05
BBS4Q96RK4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms