Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTP4Q96DX8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 AC105250.1-201ENST00000509378 2057 ntBASIC16.44■□□□□ 0.22
RTP4Q96DX8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTP4Q96DX8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.44■□□□□ 0.22
RTP4Q96DX8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTP4Q96DX8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTP4Q96DX8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTP4Q96DX8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTP4Q96DX8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTP4Q96DX8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTP4Q96DX8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTP4Q96DX8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 CICP13-201ENST00000422015 2789 ntBASIC16.43■□□□□ 0.22
RTP4Q96DX8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTP4Q96DX8 AC004987.2-201ENST00000395959 1148 ntBASIC16.43■□□□□ 0.22
RTP4Q96DX8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 SPCS2P4-201ENST00000436160 681 ntBASIC16.43■□□□□ 0.22
RTP4Q96DX8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 EEF1DP4-201ENST00000446006 880 ntBASIC16.43■□□□□ 0.22
RTP4Q96DX8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTP4Q96DX8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 AC136621.1-201ENST00000624017 2304 ntBASIC16.43■□□□□ 0.22
RTP4Q96DX8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTP4Q96DX8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTP4Q96DX8 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTP4Q96DX8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTP4Q96DX8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTP4Q96DX8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
RTP4Q96DX8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTP4Q96DX8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTP4Q96DX8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTP4Q96DX8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.42■□□□□ 0.22
RTP4Q96DX8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.42■□□□□ 0.22
RTP4Q96DX8 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RTP4Q96DX8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.42■□□□□ 0.22
RTP4Q96DX8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTP4Q96DX8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
RTP4Q96DX8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTP4Q96DX8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTP4Q96DX8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.42■□□□□ 0.22
RTP4Q96DX8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTP4Q96DX8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTP4Q96DX8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RTP4Q96DX8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTP4Q96DX8 CNN2P11-201ENST00000429351 262 ntBASIC16.42■□□□□ 0.22
RTP4Q96DX8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.42■□□□□ 0.22
RTP4Q96DX8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.42■□□□□ 0.22
RTP4Q96DX8 CEND1P1-201ENST00000451006 455 ntBASIC16.42■□□□□ 0.22
RTP4Q96DX8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTP4Q96DX8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.42■□□□□ 0.22
RTP4Q96DX8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.42■□□□□ 0.22
RTP4Q96DX8 KRT8P23-201ENST00000560090 1207 ntBASIC16.42■□□□□ 0.22
RTP4Q96DX8 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RTP4Q96DX8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTP4Q96DX8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTP4Q96DX8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.42■□□□□ 0.22
RTP4Q96DX8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RTP4Q96DX8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.42■□□□□ 0.22
RTP4Q96DX8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.42■□□□□ 0.22
RTP4Q96DX8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTP4Q96DX8 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTP4Q96DX8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RTP4Q96DX8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.42■□□□□ 0.22
RTP4Q96DX8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.42■□□□□ 0.22
RTP4Q96DX8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTP4Q96DX8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTP4Q96DX8 LINC00554-201ENST00000564841 3011 ntBASIC16.41■□□□□ 0.22
RTP4Q96DX8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTP4Q96DX8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTP4Q96DX8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTP4Q96DX8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
RTP4Q96DX8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RTP4Q96DX8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTP4Q96DX8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTP4Q96DX8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTP4Q96DX8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTP4Q96DX8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTP4Q96DX8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTP4Q96DX8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms