Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AL691432.3-201ENST00000621860 400 ntBASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 AP002414.2-201ENST00000591780 3365 ntBASIC16.21■□□□□ 0.18
SLC44A1Q8WWI5 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
SLC44A1Q8WWI5 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
SLC44A1Q8WWI5 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC44A1Q8WWI5 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC44A1Q8WWI5 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
SLC44A1Q8WWI5 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC44A1Q8WWI5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SLC44A1Q8WWI5 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SLC44A1Q8WWI5 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC44A1Q8WWI5 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC44A1Q8WWI5 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC44A1Q8WWI5 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 TPM4P1-201ENST00000436100 807 ntBASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 AL121912.1-201ENST00000603683 238 ntBASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 AC148477.8-201ENST00000624298 468 ntBASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 AC134407.2-201ENST00000625089 1978 ntBASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC44A1Q8WWI5 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 AC092127.1-201ENST00000567093 3455 ntBASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms