Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CT55Q8WUE5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CT55Q8WUE5 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.94□□□□□ -0.02
CT55Q8WUE5 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CT55Q8WUE5 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CT55Q8WUE5 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CT55Q8WUE5 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CT55Q8WUE5 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CT55Q8WUE5 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CT55Q8WUE5 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.94□□□□□ -0.02
CT55Q8WUE5 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.94□□□□□ -0.02
CT55Q8WUE5 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.94□□□□□ -0.02
CT55Q8WUE5 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.94□□□□□ -0.02
CT55Q8WUE5 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.94□□□□□ -0.02
CT55Q8WUE5 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.94□□□□□ -0.02
CT55Q8WUE5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.94□□□□□ -0.02
CT55Q8WUE5 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.94□□□□□ -0.02
CT55Q8WUE5 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.94□□□□□ -0.02
CT55Q8WUE5 AC015936.2-201ENST00000593177 259 ntBASIC14.94□□□□□ -0.02
CT55Q8WUE5 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.94□□□□□ -0.02
CT55Q8WUE5 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.94□□□□□ -0.02
CT55Q8WUE5 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.94□□□□□ -0.02
CT55Q8WUE5 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CT55Q8WUE5 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CT55Q8WUE5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CT55Q8WUE5 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CT55Q8WUE5 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CT55Q8WUE5 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CT55Q8WUE5 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CT55Q8WUE5 ALOX12P2-203ENST00000570921 1945 ntBASIC14.94□□□□□ -0.02
CT55Q8WUE5 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CT55Q8WUE5 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CT55Q8WUE5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CT55Q8WUE5 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CT55Q8WUE5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CT55Q8WUE5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CT55Q8WUE5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.93□□□□□ -0.02
CT55Q8WUE5 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CT55Q8WUE5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
CT55Q8WUE5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
CT55Q8WUE5 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CT55Q8WUE5 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CT55Q8WUE5 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CT55Q8WUE5 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CT55Q8WUE5 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.93□□□□□ -0.02
CT55Q8WUE5 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CT55Q8WUE5 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.93□□□□□ -0.02
CT55Q8WUE5 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
CT55Q8WUE5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CT55Q8WUE5 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.93□□□□□ -0.02
CT55Q8WUE5 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.93□□□□□ -0.02
CT55Q8WUE5 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.93□□□□□ -0.02
CT55Q8WUE5 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.93□□□□□ -0.02
CT55Q8WUE5 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.93□□□□□ -0.02
CT55Q8WUE5 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.93□□□□□ -0.02
CT55Q8WUE5 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.93□□□□□ -0.02
CT55Q8WUE5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.93□□□□□ -0.02
CT55Q8WUE5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.93□□□□□ -0.02
CT55Q8WUE5 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CT55Q8WUE5 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.93□□□□□ -0.02
CT55Q8WUE5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CT55Q8WUE5 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CT55Q8WUE5 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CT55Q8WUE5 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CT55Q8WUE5 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 AC106886.4-201ENST00000623557 2502 ntBASIC14.92□□□□□ -0.02
CT55Q8WUE5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CT55Q8WUE5 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 CROCCP4-201ENST00000457096 498 ntBASIC14.92□□□□□ -0.02
CT55Q8WUE5 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.92□□□□□ -0.02
CT55Q8WUE5 RPSAP52-203ENST00000622976 1023 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms