Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 ANKRD20A18P-201ENST00000359341 492 ntBASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 AL138966.2-201ENST00000621997 464 ntBASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 AC105250.1-201ENST00000509378 2057 ntBASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 AGAP7P-201ENST00000582299 2062 ntBASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 AGAP14-201ENST00000624701 2060 ntBASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 MROH4P-201ENST00000431302 1578 ntBASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 AC004817.3-201ENST00000602957 2129 ntBASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC00308Q8TCZ7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 SRC-202ENST00000373558 4304 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 PPP1R26P4-201ENST00000619065 3527 ntBASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 C18orf15-201ENST00000623680 2534 ntBASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 AC112693.3-201ENST00000624819 1983 ntBASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 AL441883.1-201ENST00000566170 1045 ntBASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 AC124864.1-201ENST00000623408 392 ntBASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC00308Q8TCZ7 AC005622.1-201ENST00000636801 1703 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms