Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC10.55□□□□□ -0.72
SMIM11BQ8TCY0 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SMIM11BQ8TCY0 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SMIM11BQ8TCY0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC10.55□□□□□ -0.72
SMIM11BQ8TCY0 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SMIM11BQ8TCY0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC10.55□□□□□ -0.72
SMIM11BQ8TCY0 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC10.55□□□□□ -0.72
SMIM11BQ8TCY0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SMIM11BQ8TCY0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SMIM11BQ8TCY0 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
SMIM11BQ8TCY0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SMIM11BQ8TCY0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
SMIM11BQ8TCY0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SMIM11BQ8TCY0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC10.55□□□□□ -0.72
SMIM11BQ8TCY0 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
SMIM11BQ8TCY0 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SMIM11BQ8TCY0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 CICP14-201ENST00000629111 2732 ntBASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 MIR4492-201ENST00000581627 80 ntBASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 MPDU1-223ENST00000582151 728 ntBASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 AC010947.1-201ENST00000623454 693 ntBASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 AGAP7P-201ENST00000582299 2062 ntBASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 AGAP14-201ENST00000624701 2060 ntBASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 AC090616.6-203ENST00000579186 1945 ntBASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SMIM11BQ8TCY0 DKFZP434A062-201ENST00000573103 5021 ntBASIC10.53□□□□□ -0.72
SMIM11BQ8TCY0 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SMIM11BQ8TCY0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SMIM11BQ8TCY0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SMIM11BQ8TCY0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC10.53□□□□□ -0.72
SMIM11BQ8TCY0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SMIM11BQ8TCY0 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SMIM11BQ8TCY0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC10.53□□□□□ -0.72
SMIM11BQ8TCY0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC10.53□□□□□ -0.72
SMIM11BQ8TCY0 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
SMIM11BQ8TCY0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
SMIM11BQ8TCY0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SMIM11BQ8TCY0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC10.53□□□□□ -0.72
SMIM11BQ8TCY0 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SMIM11BQ8TCY0 AC117489.1-201ENST00000625169 3217 ntBASIC10.53□□□□□ -0.72
SMIM11BQ8TCY0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SMIM11BQ8TCY0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms