Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 AC092910.1-201ENST00000482027 1129 ntBASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 AC008735.5-201ENST00000623544 497 ntBASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 MIR574-201ENST00000385209 96 ntBASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 LAGE3P1-201ENST00000425356 484 ntBASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 PAWRP1-201ENST00000451083 565 ntBASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 PRYP5-201ENST00000451909 266 ntBASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 AC106730.1-201ENST00000566722 1090 ntBASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 CYP2A7P1-201ENST00000595391 815 ntBASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 AC020765.3-201ENST00000613051 740 ntBASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 LINC02228-204ENST00000642115 2962 ntBASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CRLF3Q8IUI8 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 AC098831.1-202ENST00000438821 336 ntBASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 AC105339.3-201ENST00000560043 636 ntBASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.21■□□□□ 0.19
CRLF3Q8IUI8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.21■□□□□ 0.18
CRLF3Q8IUI8 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CRLF3Q8IUI8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.21■□□□□ 0.18
CRLF3Q8IUI8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CRLF3Q8IUI8 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms