Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB43Q86YS6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB43Q86YS6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB43Q86YS6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB43Q86YS6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB43Q86YS6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB43Q86YS6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB43Q86YS6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB43Q86YS6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB43Q86YS6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB43Q86YS6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB43Q86YS6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB43Q86YS6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB43Q86YS6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB43Q86YS6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB43Q86YS6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB43Q86YS6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB43Q86YS6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB43Q86YS6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB43Q86YS6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB43Q86YS6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB43Q86YS6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB43Q86YS6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB43Q86YS6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB43Q86YS6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RAB43Q86YS6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB43Q86YS6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
RAB43Q86YS6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB43Q86YS6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB43Q86YS6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB43Q86YS6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB43Q86YS6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB43Q86YS6 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.5■□□□□ 0.07
RAB43Q86YS6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.5■□□□□ 0.07
RAB43Q86YS6 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.5■□□□□ 0.07
RAB43Q86YS6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RAB43Q86YS6 PRYP6-201ENST00000514804 343 ntBASIC15.5■□□□□ 0.07
RAB43Q86YS6 AL138918.1-201ENST00000568306 659 ntBASIC15.5■□□□□ 0.07
RAB43Q86YS6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB43Q86YS6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB43Q86YS6 AC073389.1-201ENST00000595595 795 ntBASIC15.5■□□□□ 0.07
RAB43Q86YS6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB43Q86YS6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB43Q86YS6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB43Q86YS6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB43Q86YS6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB43Q86YS6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB43Q86YS6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RAB43Q86YS6 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.5■□□□□ 0.07
RAB43Q86YS6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
RAB43Q86YS6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RAB43Q86YS6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB43Q86YS6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB43Q86YS6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB43Q86YS6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB43Q86YS6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB43Q86YS6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB43Q86YS6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB43Q86YS6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB43Q86YS6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 AC142381.1-201ENST00000426099 345 ntBASIC15.49■□□□□ 0.07
RAB43Q86YS6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 TERF1P3-201ENST00000505638 1227 ntBASIC15.49■□□□□ 0.07
RAB43Q86YS6 AC190387.1-201ENST00000551683 408 ntBASIC15.49■□□□□ 0.07
RAB43Q86YS6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 RARRES2P9-201ENST00000565168 469 ntBASIC15.49■□□□□ 0.07
RAB43Q86YS6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 MIR4453-201ENST00000584019 89 ntBASIC15.49■□□□□ 0.07
RAB43Q86YS6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 AC018529.1-201ENST00000613063 361 ntBASIC15.49■□□□□ 0.07
RAB43Q86YS6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB43Q86YS6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB43Q86YS6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB43Q86YS6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB43Q86YS6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB43Q86YS6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB43Q86YS6 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB43Q86YS6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB43Q86YS6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB43Q86YS6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB43Q86YS6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.49■□□□□ 0.07
RAB43Q86YS6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms