Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPRIN2Q6IMN6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPRIN2Q6IMN6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CAPRIN2Q6IMN6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CAPRIN2Q6IMN6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPRIN2Q6IMN6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPRIN2Q6IMN6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPRIN2Q6IMN6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CAPRIN2Q6IMN6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPRIN2Q6IMN6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPRIN2Q6IMN6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.5■□□□□ 0.23
CAPRIN2Q6IMN6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.5■□□□□ 0.23
CAPRIN2Q6IMN6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 AC002347.1-201ENST00000569543 541 ntBASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 AC091167.2-201ENST00000579581 588 ntBASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 MPDU1-223ENST00000582151 728 ntBASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 AC078925.2-201ENST00000624013 1973 ntBASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPRIN2Q6IMN6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 MCCD1P2-201ENST00000423228 335 ntBASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 PDPK2P-202ENST00000562415 1191 ntBASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 MIR4515-201ENST00000584082 81 ntBASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 AC010327.4-202ENST00000591484 748 ntBASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 AL645728.2-201ENST00000641974 660 ntBASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 SLC22A20-204ENST00000530038 1673 ntBASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CAPRIN2Q6IMN6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms