Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 AC027601.4-201ENST00000611259 610 ntBASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 FAM197Y3-203ENST00000618346 717 ntBASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 PPT1-215ENST00000641471 2368 ntBASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 IGLL3P-201ENST00000412472 434 ntBASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 ACTL9-202ENST00000612068 1252 ntBASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 AL139011.1-202ENST00000642063 584 ntBASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 AL365209.1-201ENST00000624418 6473 ntBASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATPAF1Q5TC12 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
ATPAF1Q5TC12 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.15
ATPAF1Q5TC12 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.08□□□□□ -0.15
ATPAF1Q5TC12 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ATPAF1Q5TC12 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
ATPAF1Q5TC12 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
ATPAF1Q5TC12 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
ATPAF1Q5TC12 AC006277.1-201ENST00000624348 1610 ntBASIC14.08□□□□□ -0.15
ATPAF1Q5TC12 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ATPAF1Q5TC12 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
ATPAF1Q5TC12 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.08□□□□□ -0.15
ATPAF1Q5TC12 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 AC064836.3-201ENST00000607928 673 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms