Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LTBQ06643 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
LTBQ06643 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LTBQ06643 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.79□□□□□ -0.04
LTBQ06643 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
LTBQ06643 ELL2P1-201ENST00000413990 1906 ntBASIC14.79□□□□□ -0.04
LTBQ06643 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.79□□□□□ -0.04
LTBQ06643 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 MKNK2P1-201ENST00000437526 628 ntBASIC14.79□□□□□ -0.04
LTBQ06643 AC093724.1-201ENST00000448659 1027 ntBASIC14.79□□□□□ -0.04
LTBQ06643 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.79□□□□□ -0.04
LTBQ06643 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
LTBQ06643 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
LTBQ06643 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.79□□□□□ -0.04
LTBQ06643 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.79□□□□□ -0.04
LTBQ06643 AC004449.1-201ENST00000564240 433 ntBASIC14.79□□□□□ -0.04
LTBQ06643 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.79□□□□□ -0.04
LTBQ06643 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.79□□□□□ -0.04
LTBQ06643 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
LTBQ06643 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LTBQ06643 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
LTBQ06643 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LTBQ06643 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
LTBQ06643 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.78□□□□□ -0.04
LTBQ06643 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LTBQ06643 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LTBQ06643 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
LTBQ06643 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LTBQ06643 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.78□□□□□ -0.04
LTBQ06643 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LTBQ06643 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.78□□□□□ -0.04
LTBQ06643 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.78□□□□□ -0.04
LTBQ06643 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.78□□□□□ -0.04
LTBQ06643 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LTBQ06643 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.78□□□□□ -0.04
LTBQ06643 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.78□□□□□ -0.04
LTBQ06643 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.78□□□□□ -0.04
LTBQ06643 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.78□□□□□ -0.04
LTBQ06643 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.78□□□□□ -0.04
LTBQ06643 KRT18P34-201ENST00000488218 1270 ntBASIC14.78□□□□□ -0.04
LTBQ06643 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.78□□□□□ -0.04
LTBQ06643 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.78□□□□□ -0.04
LTBQ06643 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LTBQ06643 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.78□□□□□ -0.04
LTBQ06643 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.78□□□□□ -0.04
LTBQ06643 AC027612.4-201ENST00000605371 583 ntBASIC14.78□□□□□ -0.04
LTBQ06643 AC068137.2-201ENST00000605408 478 ntBASIC14.78□□□□□ -0.04
LTBQ06643 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.78□□□□□ -0.04
LTBQ06643 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LTBQ06643 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.78□□□□□ -0.04
LTBQ06643 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.78□□□□□ -0.04
LTBQ06643 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LTBQ06643 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.78□□□□□ -0.04
LTBQ06643 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LTBQ06643 AC103702.1-201ENST00000548801 2630 ntBASIC14.78□□□□□ -0.04
LTBQ06643 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.78□□□□□ -0.04
LTBQ06643 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LTBQ06643 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LTBQ06643 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LTBQ06643 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LTBQ06643 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.77□□□□□ -0.04
LTBQ06643 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms