Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC092865.6-201ENST00000642101 219 ntBASIC14.24□□□□□ -0.13
SEC61A1P61619 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SEC61A1P61619 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 CICP13-201ENST00000422015 2789 ntBASIC14.24□□□□□ -0.13
SEC61A1P61619 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SEC61A1P61619 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SEC61A1P61619 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.24□□□□□ -0.13
SEC61A1P61619 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SEC61A1P61619 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61A1P61619 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.24□□□□□ -0.13
SEC61A1P61619 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.23□□□□□ -0.13
SEC61A1P61619 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SEC61A1P61619 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.23□□□□□ -0.13
SEC61A1P61619 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SEC61A1P61619 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.23□□□□□ -0.13
SEC61A1P61619 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.23□□□□□ -0.13
SEC61A1P61619 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SEC61A1P61619 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.23□□□□□ -0.13
SEC61A1P61619 MIR1233-2-201ENST00000408138 82 ntBASIC14.23□□□□□ -0.13
SEC61A1P61619 MIR1233-1-201ENST00000408722 82 ntBASIC14.23□□□□□ -0.13
SEC61A1P61619 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.23□□□□□ -0.13
SEC61A1P61619 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
SEC61A1P61619 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.23□□□□□ -0.13
SEC61A1P61619 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.23□□□□□ -0.13
SEC61A1P61619 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SEC61A1P61619 AL513190.1-201ENST00000621254 727 ntBASIC14.23□□□□□ -0.13
SEC61A1P61619 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.23□□□□□ -0.13
SEC61A1P61619 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
SEC61A1P61619 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.23□□□□□ -0.13
SEC61A1P61619 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 AL391256.1-201ENST00000443260 1855 ntBASIC14.23□□□□□ -0.13
SEC61A1P61619 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SEC61A1P61619 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SEC61A1P61619 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61A1P61619 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SEC61A1P61619 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SEC61A1P61619 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.22□□□□□ -0.13
SEC61A1P61619 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SEC61A1P61619 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.22□□□□□ -0.13
SEC61A1P61619 AC138035.3-201ENST00000622706 2791 ntBASIC14.22□□□□□ -0.13
SEC61A1P61619 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SEC61A1P61619 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.22□□□□□ -0.13
SEC61A1P61619 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SEC61A1P61619 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SEC61A1P61619 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.22□□□□□ -0.13
SEC61A1P61619 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.22□□□□□ -0.13
SEC61A1P61619 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.22□□□□□ -0.13
SEC61A1P61619 AL603832.2-201ENST00000566195 2125 ntBASIC14.22□□□□□ -0.13
SEC61A1P61619 AC002347.1-201ENST00000569543 541 ntBASIC14.22□□□□□ -0.13
SEC61A1P61619 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.22□□□□□ -0.13
SEC61A1P61619 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.22□□□□□ -0.13
SEC61A1P61619 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.22□□□□□ -0.13
SEC61A1P61619 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.22□□□□□ -0.13
SEC61A1P61619 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61A1P61619 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms