Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PER3P56645 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
PER3P56645 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PER3P56645 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.03■□□□□ -0
PER3P56645 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 TCAF2P1-201ENST00000291129 2421 ntBASIC15.03■□□□□ -0
PER3P56645 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.03■□□□□ -0
PER3P56645 AL021920.2-201ENST00000624828 1351 ntBASIC15.03■□□□□ -0
PER3P56645 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
PER3P56645 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.03■□□□□ -0
PER3P56645 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.03■□□□□ -0
PER3P56645 HLA-V-201ENST00000429037 534 ntBASIC15.03■□□□□ -0
PER3P56645 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.03■□□□□ -0
PER3P56645 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
PER3P56645 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
PER3P56645 RN7SL692P-201ENST00000464677 288 ntBASIC15.03■□□□□ -0
PER3P56645 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.03■□□□□ -0
PER3P56645 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 ALG1L8P-201ENST00000533887 760 ntBASIC15.03■□□□□ -0
PER3P56645 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.03■□□□□ -0
PER3P56645 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PER3P56645 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PER3P56645 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.03■□□□□ -0
PER3P56645 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 AL009183.1-201ENST00000603760 355 ntBASIC15.03■□□□□ -0
PER3P56645 AL662799.1-202ENST00000614205 422 ntBASIC15.03■□□□□ -0
PER3P56645 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.03■□□□□ -0
PER3P56645 AP001350.2-201ENST00000625104 1094 ntBASIC15.03■□□□□ -0
PER3P56645 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PER3P56645 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.03■□□□□ -0
PER3P56645 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.03■□□□□ -0
PER3P56645 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
PER3P56645 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PER3P56645 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.03■□□□□ -0
PER3P56645 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.03■□□□□ -0
PER3P56645 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
PER3P56645 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
PER3P56645 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PER3P56645 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PER3P56645 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PER3P56645 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PER3P56645 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PER3P56645 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PER3P56645 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.02■□□□□ -0
PER3P56645 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PER3P56645 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.02■□□□□ -0
PER3P56645 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PER3P56645 WASH6P-202ENST00000359512 1437 ntBASIC15.02■□□□□ -0
PER3P56645 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.02■□□□□ -0
PER3P56645 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PER3P56645 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.02■□□□□ -0
PER3P56645 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.02■□□□□ -0
PER3P56645 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PER3P56645 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PER3P56645 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PER3P56645 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.02■□□□□ -0
PER3P56645 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.02■□□□□ -0
PER3P56645 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.02■□□□□ -0
PER3P56645 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PER3P56645 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PER3P56645 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
PER3P56645 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PER3P56645 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.02■□□□□ -0
PER3P56645 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.02■□□□□ -0
PER3P56645 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
PER3P56645 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.02■□□□□ -0
PER3P56645 HCG4-201ENST00000418983 998 ntBASIC15.02■□□□□ -0
PER3P56645 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PER3P56645 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.02■□□□□ -0
PER3P56645 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.02■□□□□ -0
PER3P56645 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.02■□□□□ -0
PER3P56645 AC109635.5-201ENST00000533593 962 ntBASIC15.02■□□□□ -0
PER3P56645 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.02■□□□□ -0
PER3P56645 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PER3P56645 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.02■□□□□ -0
PER3P56645 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.02■□□□□ -0
PER3P56645 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.02■□□□□ -0
PER3P56645 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PER3P56645 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms