Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.36□□□□□ -0.11
SLC25A1P53007 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC25A1P53007 AC068137.2-201ENST00000605408 478 ntBASIC14.36□□□□□ -0.11
SLC25A1P53007 AC023157.3-201ENST00000619086 2088 ntBASIC14.36□□□□□ -0.11
SLC25A1P53007 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SLC25A1P53007 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SLC25A1P53007 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC25A1P53007 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC25A1P53007 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC25A1P53007 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.36□□□□□ -0.11
SLC25A1P53007 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SLC25A1P53007 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC25A1P53007 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC25A1P53007 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC25A1P53007 HLA-A-201ENST00000376802 1334 ntBASIC14.36□□□□□ -0.11
SLC25A1P53007 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC25A1P53007 AC136621.1-201ENST00000624017 2304 ntBASIC14.36□□□□□ -0.11
SLC25A1P53007 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC25A1P53007 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC25A1P53007 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
SLC25A1P53007 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SLC25A1P53007 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
SLC25A1P53007 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.35□□□□□ -0.11
SLC25A1P53007 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.35□□□□□ -0.11
SLC25A1P53007 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SLC25A1P53007 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC25A1P53007 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC25A1P53007 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC25A1P53007 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC25A1P53007 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
SLC25A1P53007 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC25A1P53007 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SLC25A1P53007 AC092850.2-201ENST00000623821 2697 ntBASIC14.35□□□□□ -0.11
SLC25A1P53007 AC134407.2-201ENST00000625089 1978 ntBASIC14.35□□□□□ -0.11
SLC25A1P53007 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC25A1P53007 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC25A1P53007 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC25A1P53007 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.35□□□□□ -0.11
SLC25A1P53007 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC25A1P53007 AC034105.1-201ENST00000563488 319 ntBASIC14.35□□□□□ -0.11
SLC25A1P53007 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.35□□□□□ -0.11
SLC25A1P53007 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC25A1P53007 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.35□□□□□ -0.11
SLC25A1P53007 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC25A1P53007 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC25A1P53007 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC25A1P53007 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC25A1P53007 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC25A1P53007 AC087481.3-201ENST00000602886 1894 ntBASIC14.35□□□□□ -0.11
SLC25A1P53007 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC25A1P53007 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC25A1P53007 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC25A1P53007 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC25A1P53007 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC25A1P53007 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC25A1P53007 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC25A1P53007 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC25A1P53007 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC25A1P53007 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC25A1P53007 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC25A1P53007 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC25A1P53007 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC25A1P53007 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC25A1P53007 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC25A1P53007 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC25A1P53007 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SLC25A1P53007 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC25A1P53007 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC25A1P53007 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC25A1P53007 AC144831.1-201ENST00000573312 2656 ntBASIC14.34□□□□□ -0.11
SLC25A1P53007 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SLC25A1P53007 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC25A1P53007 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC25A1P53007 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC25A1P53007 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SLC25A1P53007 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC25A1P53007 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC25A1P53007 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC25A1P53007 TPM4P1-201ENST00000436100 807 ntBASIC14.34□□□□□ -0.11
SLC25A1P53007 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
SLC25A1P53007 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
SLC25A1P53007 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.34□□□□□ -0.11
SLC25A1P53007 AC074386.1-202ENST00000463561 864 ntBASIC14.34□□□□□ -0.11
SLC25A1P53007 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC25A1P53007 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SLC25A1P53007 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SLC25A1P53007 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC25A1P53007 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SLC25A1P53007 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
SLC25A1P53007 AP002472.1-201ENST00000577490 586 ntBASIC14.34□□□□□ -0.11
SLC25A1P53007 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC25A1P53007 AC024267.1-201ENST00000582320 895 ntBASIC14.34□□□□□ -0.11
SLC25A1P53007 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC25A1P53007 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.34□□□□□ -0.11
SLC25A1P53007 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC25A1P53007 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC25A1P53007 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC25A1P53007 TSPY26P-202ENST00000565928 3884 ntBASIC14.34□□□□□ -0.11
SLC25A1P53007 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC25A1P53007 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms