Protein–RNA interactions for Protein: P42772

CDKN2B, Cyclin-dependent kinase 4 inhibitor B, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2BP42772 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKN2BP42772 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDKN2BP42772 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKN2BP42772 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKN2BP42772 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.69■□□□□ 0.26
CDKN2BP42772 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKN2BP42772 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDKN2BP42772 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKN2BP42772 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKN2BP42772 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDKN2BP42772 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDKN2BP42772 AL596257.1-201ENST00000641463 2694 ntBASIC16.68■□□□□ 0.26
CDKN2BP42772 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKN2BP42772 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDKN2BP42772 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CDKN2BP42772 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDKN2BP42772 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDKN2BP42772 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKN2BP42772 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CDKN2BP42772 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDKN2BP42772 FAM220BP-201ENST00000377689 816 ntBASIC16.68■□□□□ 0.26
CDKN2BP42772 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDKN2BP42772 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.68■□□□□ 0.26
CDKN2BP42772 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.68■□□□□ 0.26
CDKN2BP42772 KRT18P58-201ENST00000527480 1120 ntBASIC16.68■□□□□ 0.26
CDKN2BP42772 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.68■□□□□ 0.26
CDKN2BP42772 AP000842.3-202ENST00000569238 1080 ntBASIC16.68■□□□□ 0.26
CDKN2BP42772 AC026120.1-201ENST00000611536 926 ntBASIC16.68■□□□□ 0.26
CDKN2BP42772 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.68■□□□□ 0.26
CDKN2BP42772 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CDKN2BP42772 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.68■□□□□ 0.26
CDKN2BP42772 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDKN2BP42772 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDKN2BP42772 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDKN2BP42772 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKN2BP42772 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDKN2BP42772 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CDKN2BP42772 AC136621.1-201ENST00000624017 2304 ntBASIC16.68■□□□□ 0.26
CDKN2BP42772 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKN2BP42772 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKN2BP42772 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.68■□□□□ 0.26
CDKN2BP42772 BNIP3P1-202ENST00000550043 1585 ntBASIC16.68■□□□□ 0.26
CDKN2BP42772 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDKN2BP42772 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CDKN2BP42772 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDKN2BP42772 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.67■□□□□ 0.26
CDKN2BP42772 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDKN2BP42772 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDKN2BP42772 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
CDKN2BP42772 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDKN2BP42772 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDKN2BP42772 AC144831.1-201ENST00000573312 2656 ntBASIC16.67■□□□□ 0.26
CDKN2BP42772 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDKN2BP42772 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDKN2BP42772 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDKN2BP42772 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDKN2BP42772 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDKN2BP42772 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.67■□□□□ 0.26
CDKN2BP42772 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CDKN2BP42772 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.67■□□□□ 0.26
CDKN2BP42772 YBX2P1-201ENST00000394192 760 ntBASIC16.67■□□□□ 0.26
CDKN2BP42772 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.67■□□□□ 0.26
CDKN2BP42772 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDKN2BP42772 AC004832.2-201ENST00000426397 482 ntBASIC16.67■□□□□ 0.26
CDKN2BP42772 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.67■□□□□ 0.26
CDKN2BP42772 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.67■□□□□ 0.26
CDKN2BP42772 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.67■□□□□ 0.26
CDKN2BP42772 AC079140.1-201ENST00000508039 487 ntBASIC16.67■□□□□ 0.26
CDKN2BP42772 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.67■□□□□ 0.26
CDKN2BP42772 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.67■□□□□ 0.26
CDKN2BP42772 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.67■□□□□ 0.26
CDKN2BP42772 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.67■□□□□ 0.26
CDKN2BP42772 AC243562.2-201ENST00000561247 970 ntBASIC16.67■□□□□ 0.26
CDKN2BP42772 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.67■□□□□ 0.26
CDKN2BP42772 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.67■□□□□ 0.26
CDKN2BP42772 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDKN2BP42772 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDKN2BP42772 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDKN2BP42772 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.67■□□□□ 0.26
CDKN2BP42772 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.67■□□□□ 0.26
CDKN2BP42772 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CDKN2BP42772 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.67■□□□□ 0.26
CDKN2BP42772 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.67■□□□□ 0.26
CDKN2BP42772 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CDKN2BP42772 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.67■□□□□ 0.26
CDKN2BP42772 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDKN2BP42772 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.67■□□□□ 0.26
CDKN2BP42772 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CDKN2BP42772 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2BP42772 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2BP42772 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.66■□□□□ 0.26
CDKN2BP42772 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2BP42772 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.66■□□□□ 0.26
CDKN2BP42772 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2BP42772 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.66■□□□□ 0.26
CDKN2BP42772 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2BP42772 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2BP42772 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CDKN2BP42772 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKN2BP42772 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms