Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCND1P24385 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCND1P24385 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCND1P24385 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCND1P24385 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CCND1P24385 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.34■□□□□ 0.21
CCND1P24385 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCND1P24385 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CCND1P24385 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCND1P24385 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCND1P24385 AC006277.1-201ENST00000624348 1610 ntBASIC16.34■□□□□ 0.21
CCND1P24385 AC006486.2-201ENST00000624246 2199 ntBASIC16.34■□□□□ 0.21
CCND1P24385 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CCND1P24385 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCND1P24385 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.34■□□□□ 0.21
CCND1P24385 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCND1P24385 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.34■□□□□ 0.21
CCND1P24385 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CCND1P24385 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCND1P24385 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCND1P24385 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCND1P24385 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.34■□□□□ 0.21
CCND1P24385 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCND1P24385 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCND1P24385 HCG4-201ENST00000418983 998 ntBASIC16.34■□□□□ 0.21
CCND1P24385 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
CCND1P24385 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.34■□□□□ 0.21
CCND1P24385 AC079776.4-201ENST00000511039 504 ntBASIC16.34■□□□□ 0.21
CCND1P24385 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.34■□□□□ 0.21
CCND1P24385 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.34■□□□□ 0.21
CCND1P24385 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.34■□□□□ 0.21
CCND1P24385 AC107918.2-201ENST00000530817 355 ntBASIC16.34■□□□□ 0.21
CCND1P24385 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.34■□□□□ 0.21
CCND1P24385 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.34■□□□□ 0.21
CCND1P24385 MIR4751-201ENST00000578027 74 ntBASIC16.34■□□□□ 0.21
CCND1P24385 MPDU1-223ENST00000582151 728 ntBASIC16.34■□□□□ 0.21
CCND1P24385 AL121894.2-201ENST00000602977 491 ntBASIC16.34■□□□□ 0.21
CCND1P24385 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCND1P24385 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCND1P24385 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.34■□□□□ 0.21
CCND1P24385 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCND1P24385 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
CCND1P24385 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCND1P24385 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CCND1P24385 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCND1P24385 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCND1P24385 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCND1P24385 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCND1P24385 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.33■□□□□ 0.21
CCND1P24385 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCND1P24385 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCND1P24385 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.33■□□□□ 0.21
CCND1P24385 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCND1P24385 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CCND1P24385 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCND1P24385 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCND1P24385 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CCND1P24385 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.33■□□□□ 0.21
CCND1P24385 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.33■□□□□ 0.21
CCND1P24385 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CCND1P24385 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCND1P24385 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCND1P24385 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CCND1P24385 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.33■□□□□ 0.2
CCND1P24385 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCND1P24385 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.33■□□□□ 0.2
CCND1P24385 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCND1P24385 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CCND1P24385 AC009947.1-201ENST00000444350 727 ntBASIC16.33■□□□□ 0.2
CCND1P24385 RNA5SP415-201ENST00000517246 115 ntBASIC16.33■□□□□ 0.2
CCND1P24385 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.33■□□□□ 0.2
CCND1P24385 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.33■□□□□ 0.2
CCND1P24385 Z83851.2-201ENST00000609564 659 ntBASIC16.33■□□□□ 0.2
CCND1P24385 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.33■□□□□ 0.2
CCND1P24385 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCND1P24385 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CCND1P24385 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCND1P24385 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCND1P24385 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCND1P24385 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCND1P24385 AC067930.6-201ENST00000623257 4947 ntBASIC16.33■□□□□ 0.2
CCND1P24385 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCND1P24385 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.33■□□□□ 0.2
CCND1P24385 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CCND1P24385 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.33■□□□□ 0.2
CCND1P24385 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCND1P24385 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.33■□□□□ 0.2
CCND1P24385 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCND1P24385 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCND1P24385 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCND1P24385 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCND1P24385 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCND1P24385 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.33■□□□□ 0.2
CCND1P24385 CICP24-201ENST00000605464 2705 ntBASIC16.32■□□□□ 0.2
CCND1P24385 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCND1P24385 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCND1P24385 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCND1P24385 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCND1P24385 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCND1P24385 CRYGEP-201ENST00000412192 528 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms