Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.39■□□□□ 0.21
VCANP13611 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.39■□□□□ 0.21
VCANP13611 AC087045.2-201ENST00000606279 1003 ntBASIC16.39■□□□□ 0.21
VCANP13611 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
VCANP13611 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VCANP13611 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
VCANP13611 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.39■□□□□ 0.21
VCANP13611 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
VCANP13611 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VCANP13611 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCANP13611 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.38■□□□□ 0.21
VCANP13611 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.38■□□□□ 0.21
VCANP13611 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VCANP13611 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
VCANP13611 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC16.38■□□□□ 0.21
VCANP13611 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC16.38■□□□□ 0.21
VCANP13611 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.38■□□□□ 0.21
VCANP13611 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.38■□□□□ 0.21
VCANP13611 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
VCANP13611 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
VCANP13611 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCANP13611 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.38■□□□□ 0.21
VCANP13611 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VCANP13611 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC16.38■□□□□ 0.21
VCANP13611 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCANP13611 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.38■□□□□ 0.21
VCANP13611 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.38■□□□□ 0.21
VCANP13611 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCANP13611 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCANP13611 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
VCANP13611 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCANP13611 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCANP13611 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.38■□□□□ 0.21
VCANP13611 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.38■□□□□ 0.21
VCANP13611 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCANP13611 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCANP13611 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.38■□□□□ 0.21
VCANP13611 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCANP13611 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VCANP13611 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.38■□□□□ 0.21
VCANP13611 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCANP13611 RN7SL713P-201ENST00000582127 302 ntBASIC16.38■□□□□ 0.21
VCANP13611 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.38■□□□□ 0.21
VCANP13611 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
VCANP13611 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.37■□□□□ 0.21
VCANP13611 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.37■□□□□ 0.21
VCANP13611 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
VCANP13611 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCANP13611 KRT8P49-201ENST00000604166 1432 ntBASIC16.37■□□□□ 0.21
VCANP13611 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCANP13611 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCANP13611 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
VCANP13611 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.37■□□□□ 0.21
VCANP13611 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCANP13611 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
VCANP13611 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.37■□□□□ 0.21
VCANP13611 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.37■□□□□ 0.21
VCANP13611 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCANP13611 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
VCANP13611 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
VCANP13611 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCANP13611 HYMAI-201ENST00000635591 3347 ntBASIC16.37■□□□□ 0.21
VCANP13611 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
VCANP13611 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VCANP13611 NOC2LP1-201ENST00000450578 752 ntBASIC16.37■□□□□ 0.21
VCANP13611 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.37■□□□□ 0.21
VCANP13611 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCANP13611 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC16.37■□□□□ 0.21
VCANP13611 ECM1P1-201ENST00000604092 1279 ntBASIC16.37■□□□□ 0.21
VCANP13611 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.37■□□□□ 0.21
VCANP13611 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.37■□□□□ 0.21
VCANP13611 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCANP13611 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.37■□□□□ 0.21
VCANP13611 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.37■□□□□ 0.21
VCANP13611 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.37■□□□□ 0.21
VCANP13611 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.37■□□□□ 0.21
VCANP13611 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.37■□□□□ 0.21
VCANP13611 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.37■□□□□ 0.21
VCANP13611 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCANP13611 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCANP13611 RPL18P13-201ENST00000478088 569 ntBASIC16.37■□□□□ 0.21
VCANP13611 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.37■□□□□ 0.21
VCANP13611 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VCANP13611 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VCANP13611 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VCANP13611 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
VCANP13611 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
VCANP13611 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
VCANP13611 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
VCANP13611 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VCANP13611 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC16.36■□□□□ 0.21
VCANP13611 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.36■□□□□ 0.21
VCANP13611 AC138466.4-201ENST00000623965 852 ntBASIC16.36■□□□□ 0.21
VCANP13611 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VCANP13611 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VCANP13611 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
VCANP13611 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VCANP13611 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VCANP13611 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VCANP13611 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms