Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40ALP0C0E4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 AC005622.1-201ENST00000636801 1703 ntBASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 CICP6-201ENST00000457191 2729 ntBASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 CU639417.3-201ENST00000624240 1404 ntBASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 AC093004.1-201ENST00000508850 424 ntBASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 API5-211ENST00000534695 560 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 AC140912.1-201ENST00000577171 1054 ntBASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 MIR4321-201ENST00000592276 80 ntBASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 GGT3P-204ENST00000453783 1664 ntBASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40ALP0C0E4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB40ALP0C0E4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.21■□□□□ 0.02
RAB40ALP0C0E4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB40ALP0C0E4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RAB40ALP0C0E4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 COX5BP8-201ENST00000416911 349 ntBASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms